Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 168 8e-37 >seq5 Length=553973 Score = 168 bits (186), Expect = 8e-37 Identities = 815/1290 (63%), Gaps = 32/1290 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||||| || ||| ||||| || ||||| | |||||| ||||||| ||||| Sbjct 295405 TACATATTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 295346 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| ||||||||| | ||| | | ||| | | | | | || | Sbjct 295345 GCAGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTTCATGACATCTTTC 295286 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121 | | | ||||| || | || | | | | ||||||||| ||||| || Sbjct 295285 CTCAAAGTATCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGT 295226 Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181 |||||||| || ||||| || || | || || |||||||| || || | || | | Sbjct 295225 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGT 295166 Query 114182 TC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 114237 || | |||| | | |||| | ||||| ||||| ||||| || | ||| | Sbjct 295165 TCACAAGAAGCTTCCATAGAGG----CATGATAAATTGTTTCAAAGATTTGGATATTTAG 295110 Query 114238 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 114297 | |||||| || |||||||| | | || ||| || || || || | ||| Sbjct 295109 TAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACC 295050 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGG 114357 ||| ||||| | ||||||| | |||||||||||| || ||| || || || || Sbjct 295049 TTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGG 294990 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || |||| | ||| ||||| || |||| ||| || ||||| || | ||||| || Sbjct 294989 GTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTG 294930 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCAT-TGACAT--------ACTTAGG 114465 | |||| | | | | | ||| | | || | |||| | || || Sbjct 294929 TAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGG 294870 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 | ||| | || |||| ||||| |||| || || ||| | | | |||||| | ||| Sbjct 294869 CAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAAT 294810 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 ||| || || ||||| ||| ||| || ||||| ||||| || |||||| |||| Sbjct 294809 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTT 294750 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 || ||||| || |||| | | || || ||||| || ||||| | | | ||| | Sbjct 294749 GCAAGCATCTTTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGA 294690 Query 114646 CTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 114705 | ||| | | || | | ||| || | || || || | ||||| || Sbjct 294689 ATACCATAATTTTTGAGC---CTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGT 294633 Query 114706 GTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763 || || ||||||||||| || || || | | || ||| || || || ||| Sbjct 294632 ATATAGAGCTTCAAACTCGTCGCCGTAACAGTCGCTTAGA--CCAGGAGCGGCTGTTGGA 294575 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 |||| | || ||| ||| ||| || |||||||||||||| || || || ||||| Sbjct 294574 GAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCAT 294515 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 ||||| | || | ||| | ||| |||||| | || || || | | || Sbjct 294514 AGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCA 294455 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTT 114939 | ||| || | ||||| || ||||| ||||||||||||| || | | || ||| Sbjct 294454 ATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTT 294395 Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | |||| |||||| ||||| | || ||| |||||| || |||| ||| ||||| Sbjct 294394 TTG-TTACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAAT 294336 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 | || | ||| || ||||| || ||| ||| | | | | | || ||| Sbjct 294335 TAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATG 294276 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 ||| || | ||||||||| || || || || || || || || | | | || | Sbjct 294275 GATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTC 294216 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 ||| || || ||||| ||||| |||| | |||| | ||| || |||||||| || Sbjct 294215 GTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGG 294156 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGG 115209 |||| |||||||| || || | ||||| Sbjct 294155 TTTTGGAGTACCAGCATTAAACAAAGTTGG 294126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353473062360