Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq12 114 1e-20
seq9 95.1 1e-14
>seq12
Length=1026045
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||||| ||| | || || || ||||| |||||||| || | | ||| | |
Sbjct 54179 TCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 54238
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|||||| || ||||| || ||| | || | | ||| || || |||||||| ||||||||
Sbjct 54239 GTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTT 54298
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || |||||| ||| || || | |||||| | || ||||| | ||||
Sbjct 54299 GTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTAT 54358
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || ||||||||||| || || |||||||||||
Sbjct 54359 GGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||||| ||| | || || || ||||| |||||||| || | | ||| | |
Sbjct 53723 TCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACC 53782
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|||||| || ||||| || ||| | || | | ||| ||||| |||||||| ||||| ||
Sbjct 53783 GTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTT 53842
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||| || || | || || | || || |||| ||||
Sbjct 53843 ATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 53902
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || || || | |||||| || |||||||||||
Sbjct 53903 AGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | || | || | || ||||| ||||| |||||||| || |
Sbjct 469439 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 469380
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 469379 CAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 469320
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || || ||| ||| || | || ||| | || ||
Sbjct 469319 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 469260
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||| || | ||||| ||||| ||||| || |||||||||||||| ||
Sbjct 469259 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209
>seq9
Length=442403
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| || | || |||||||||||||||||||| || |
Sbjct 64041 ACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 63982
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 63981 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 63922
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || ||||| || ||| ||| ||| || | || ||| | || ||
Sbjct 63921 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 63862
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| || |||||||| || || |||
Sbjct 63861 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644693825480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |