Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq12 123 2e-23
seq9 87.8 2e-12
seq11 82.4 8e-11
>seq12
Length=1026045
Score = 123 bits (136), Expect = 2e-23
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|| |||||||||| | ||||||||||| |||||||||||| || || | |||
Sbjct 53727 AACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 53786
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| ||||| ||||| | | |||| | | ||||||||| ||||| |||||||| || ||
Sbjct 53787 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC- 53845
Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580
||| | || | || | ||| || | ||||||| || || ||||| | || | |
Sbjct 53846 CTGAATCTTGCTCTTCACGTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAG 53904
Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||||| |||||||| |||||||| |||||
Sbjct 53905 TTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
|| |||||||||| | ||||||||||| |||||||||||| || || | |||
Sbjct 54183 AACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 54242
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| ||||| ||||| | | |||| | | |||||| || ||||| ||||||||||||||
Sbjct 54243 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTC- 54301
Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| |||||| || | | || | || || | || || || || | || | ||
Sbjct 54302 CTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGT 54361
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| |||| ||| || |||||||| |||||
Sbjct 54362 TTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 105 bits (116), Expect = 7e-18
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | || ||||||||||| |||||||||
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || | || | || || ||||| ||||||| | | || | | ||||||||| |||||
Sbjct 54000 AACGTTCTGCCA-TCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 54058
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
|||||||| || || ||| |||| | || | |||| | | ||||||| || ||
Sbjct 54059 AATACCTTCCTTATCT-TGAATTTTCGACTTGACGTTGT-CAATCGTGTCGGAAGATTCG 54116
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | || ||||||||||| || || ||||| ||||||||
Sbjct 54117 ACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166
Score = 100 bits (110), Expect = 3e-16
Identities = 144/197 (73%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479
|| ||||||||||| ||||||||| | || | || | || || ||||| |||||||
Sbjct 53517 GATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA-TCTTCCAGTTGCTTACCGGC 53575
Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539
| | || | | ||||||||| ||||| |||||||| || || ||| |||| | || |
Sbjct 53576 AAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTCGACTTGA 53634
Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597
|||| | | ||||||| || || ||||| | || | || ||||||||||| ||
Sbjct 53635 CGTTGT-CAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTC 53693
Query 138598 TTTACAAAAATCTGCAT 138614
|| ||||| ||||||||
Sbjct 53694 TTAACAAAGATCTGCAT 53710
>seq9
Length=442403
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| |||| | || || ||||||||||||||||| |
Sbjct 64040 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63981
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||| | | |||||||| || ||
Sbjct 63980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63921
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| | |||| || |||| || | ||||| | || || |
Sbjct 63920 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 63863
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| ||| || ||||||
Sbjct 63862 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63822
>seq11
Length=679893
Score = 82.4 bits (90), Expect = 8e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || | |||||| ||||||| | || |||||||| |||||||||||
Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || | ||| ||||||| | |||| | | |||||||| || ||
Sbjct 629610 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 629669
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| || || ||| || || | |||| || | |||||| | || || ||
Sbjct 629670 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCAGAAGATTCAAC 629728
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605
|| | || | || |||||||||| ||| || || ||
Sbjct 629729 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 629767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262294544240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |