Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12 123 2e-23 seq9 87.8 2e-12 seq11 82.4 8e-11 >seq12 Length=1026045 Score = 123 bits (136), Expect = 2e-23 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 || |||||||||| | ||||||||||| |||||||||||| || || | ||| Sbjct 53727 AACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 53786 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||| | | |||| | | ||||||||| ||||| |||||||| || || Sbjct 53787 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATC- 53845 Query 138523 GTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | ||| || | ||||||| || || ||||| | || | | Sbjct 53846 CTGAATCTTGCTCTTCACGTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAG 53904 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||||| |||||||| |||||||| ||||| Sbjct 53905 TTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 || |||||||||| | ||||||||||| |||||||||||| || || | ||| Sbjct 54183 AACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 54242 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || ||||| ||||| | | |||| | | |||||| || ||||| |||||||||||||| Sbjct 54243 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTC- 54301 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||||| || | | || | || || | || || || || | || | || Sbjct 54302 CTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGT 54361 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| |||| ||| || |||||||| ||||| Sbjct 54362 TTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394 Score = 105 bits (116), Expect = 7e-18 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | || ||||||||||| ||||||||| Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | || | || || ||||| ||||||| | | || | | ||||||||| ||||| Sbjct 54000 AACGTTCTGCCA-TCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 54058 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 |||||||| || || ||| |||| | || | |||| | | ||||||| || || Sbjct 54059 AATACCTTCCTTATCT-TGAATTTTCGACTTGACGTTGT-CAATCGTGTCGGAAGATTCG 54116 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || ||||||||||| || || ||||| |||||||| Sbjct 54117 ACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166 Score = 100 bits (110), Expect = 3e-16 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 || ||||||||||| ||||||||| | || | || | || || ||||| ||||||| Sbjct 53517 GATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA-TCTTCCAGTTGCTTACCGGC 53575 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | | || | | ||||||||| ||||| |||||||| || || ||| |||| | || | Sbjct 53576 AAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTCGACTTGA 53634 Query 138540 --TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| | | ||||||| || || ||||| | || | || ||||||||||| || Sbjct 53635 CGTTGT-CAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTC 53693 Query 138598 TTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 53694 TTAACAAAGATCTGCAT 53710 >seq9 Length=442403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| ||||| |||| | || || ||||||||||||||||| | Sbjct 64040 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63981 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||| | | |||||||| || || Sbjct 63980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63921 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || |||| || | ||||| | || || | Sbjct 63920 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTG-TCAATAGTGTCAGAAGATTCAA 63863 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| ||| || |||||| Sbjct 63862 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63822 >seq11 Length=679893 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| ||||||| | || |||||||| ||||||||||| Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || | ||| ||||||| | |||| | | |||||||| || || Sbjct 629610 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 629669 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| || || | |||| || | |||||| | || || || Sbjct 629670 ATACCTTCCTTATCTTGGATCTTGGACTTGACATTG-TCAATGGTGTCAGAAGATTCAAC 629728 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 || | || | || |||||||||| ||| || || || Sbjct 629729 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 629767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262294544240