Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 5e-33
>seq5
Length=553973
Score = 156 bits (172), Expect = 5e-33
Identities = 720/1132 (64%), Gaps = 34/1132 (3%)
Strand=Plus/Minus
Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121
||||||||||| ||||| || |||||||| || ||||| || || | || || || |||
Sbjct 295246 TCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTAT 295187
Query 116122 GGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177
|| || || | || | ||| | |||| | | |||| | ||||| |||||
Sbjct 295186 GGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATAGAGG----CATGATAAATTGT 295131
Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237
||||| || | ||| | | |||||| || |||||||| | | ||| |||
Sbjct 295130 TTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAA 295071
Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297
|| || || || | |||||| ||||| | ||||||| | |||||||||||| ||
Sbjct 295070 CATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGA 295011
Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357
||| || || || || || |||| | ||| ||||| || |||| ||| ||
Sbjct 295010 TCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGT 294951
Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCAT- 116413
||||| || | ||||| || | |||| | | | | | ||| | | || |
Sbjct 294950 AACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTC 294891
Query 116414 TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 116465
|||| | || || | ||| | || |||| ||||| |||| || || ||
Sbjct 294890 TGACGTTTCAATGAACGCTGGCAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTCGTC 294831
Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525
| | | | |||||| | |||||| || || ||||| ||| ||| || |||||
Sbjct 294830 CGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTT 294771
Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
||||| || |||||| |||| || ||||| || || | | | | || || ||||| ||
Sbjct 294770 TTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACGACAAAAGGTGTACCCGTTTC 294711
Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCG 116645
||||| | | | ||| | | ||||| || | | | | ||| || | ||
Sbjct 294710 AGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG--AGCCTTAATGGTCTTACCACG 294654
Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAG 116703
|| || | ||||| || || || || |||||||| || || |||| | || ||
Sbjct 294653 ACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCGCCGTAACAGTCGCTTAG 294594
Query 116704 AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763
| || || || |||| |||| | || ||| ||| ||| || || ||||||
Sbjct 294593 A--CCAGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTC 294536
Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 116823
||||| || || || ||||| || || | || | ||| | ||| |||||| |
Sbjct 294535 ATGAAAAGATCGGGAATCCATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTA 294476
Query 116824 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 116883
|| || || | | || | ||| || | ||||| || ||||| ||||||||||||
Sbjct 294475 CCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTAC 294416
Query 116884 ACCGCGATTGACCC----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939
| || | | || ||| | |||| |||||| ||||| | || || ||
Sbjct 294415 AGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTGTTATT 294357
Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG- 116998
||| || |||| ||| ||||| | || | ||| || ||||| || ||| ||
Sbjct 294356 AAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGA 294297
Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058
|| ||| | | | || ||||| || | ||||||||| || || || || ||
Sbjct 294296 ACCAGTT-GAACGAATATTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 294238
Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118
|| || || | | | || |||| || || ||||| ||||| |||| | |||| |
Sbjct 294237 AAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCA 294178
Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170
||| || |||||||| || |||| |||||||| || || | |||||
Sbjct 294177 AGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGG 294126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507069629720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |