Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 156 5e-33 >seq5 Length=553973 Score = 156 bits (172), Expect = 5e-33 Identities = 720/1132 (64%), Gaps = 34/1132 (3%) Strand=Plus/Minus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 ||||||||||| ||||| || |||||||| || ||||| || || | || || || ||| Sbjct 295246 TCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTAT 295187 Query 116122 GGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177 || || || | || | ||| | |||| | | |||| | ||||| ||||| Sbjct 295186 GGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCATAGAGG----CATGATAAATTGT 295131 Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237 ||||| || | ||| | | |||||| || |||||||| | | ||| ||| Sbjct 295130 TTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAA 295071 Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 || || || || | |||||| ||||| | ||||||| | |||||||||||| || Sbjct 295070 CATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGA 295011 Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 ||| || || || || || |||| | ||| ||||| || |||| ||| || Sbjct 295010 TCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGT 294951 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCAT- 116413 ||||| || | ||||| || | |||| | | | | | ||| | | || | Sbjct 294950 AACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTC 294891 Query 116414 TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 116465 |||| | || || | ||| | || |||| ||||| |||| || || || Sbjct 294890 TGACGTTTCAATGAACGCTGGCAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTCGTC 294831 Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525 | | | | |||||| | |||||| || || ||||| ||| ||| || ||||| Sbjct 294830 CGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTT 294771 Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585 ||||| || |||||| |||| || ||||| || || | | | | || || ||||| || Sbjct 294770 TTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAACGACAAAAGGTGTACCCGTTTC 294711 Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCG 116645 ||||| | | | ||| | | ||||| || | | | | ||| || | || Sbjct 294710 AGTTTGTGCTTCCAAAATGGAATACCATA-ATTTTTG--AGCCTTAATGGTCTTACCACG 294654 Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAG 116703 || || | ||||| || || || || |||||||| || || |||| | || || Sbjct 294653 ACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAACTCGTCGCCGTAACAGTCGCTTAG 294594 Query 116704 AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763 | || || || |||| |||| | || ||| ||| ||| || || |||||| Sbjct 294593 A--CCAGGAGCGGCTGTTGGAGAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTC 294536 Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 116823 ||||| || || || ||||| || || | || | ||| | ||| |||||| | Sbjct 294535 ATGAAAAGATCGGGAATCCATAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTA 294476 Query 116824 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 116883 || || || | | || | ||| || | ||||| || ||||| |||||||||||| Sbjct 294475 CCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTAC 294416 Query 116884 ACCGCGATTGACCC----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939 | || | | || ||| | |||| |||||| ||||| | || || || Sbjct 294415 AGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTGTTATT 294357 Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG- 116998 ||| || |||| ||| ||||| | || | ||| || ||||| || ||| || Sbjct 294356 AAAAACACGAATCATGGGAATTAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGA 294297 Query 116999 ACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 117058 || ||| | | | || ||||| || | ||||||||| || || || || || Sbjct 294296 ACCAGTT-GAACGAATATTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCA 294238 Query 117059 GTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 117118 || || || | | | || |||| || || ||||| ||||| |||| | |||| | Sbjct 294237 AAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCA 294178 Query 117119 GGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 ||| || |||||||| || |||| |||||||| || || | ||||| Sbjct 294177 AGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGG 294126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507069629720