Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 4e-25
seq9 105 2e-17
seq11 95.1 3e-14
>seq12
Length=1026045
Score = 131 bits (144), Expect = 4e-25
Identities = 146/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| ||||||||||||| ||||||||| | ||| || || || |||||||| ||||| ||
Sbjct 53741 AGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACC 53800
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
|| ||||| | | ||| ||||| ||| ||| ||||| ||||||||||| |||
Sbjct 53801 AGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTTGCTCTT 53860
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
|||| || | ||||| | | ||| || || | || || || ||||| || |||||
Sbjct 53861 CACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTACCAGTTAGAGT 53920
Query 199612 TTTCACAAAAATTTG 199626
||| |||||||||||
Sbjct 53921 TTTGACAAAAATTTG 53935
Score = 122 bits (134), Expect = 2e-22
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491
||| ||||||||||||| ||||||||| | ||| || || || |||||||| ||||| ||
Sbjct 54197 AGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAGTTGCTTACC 54256
Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551
|| ||||| | | ||| || || ||| ||| |||||| |||||||| ||| |||
Sbjct 54257 AGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTT 54316
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
||| || | || || | | ||| || ||||| || || || ||||| || | |||
Sbjct 54317 GACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGT 54376
Query 199612 TTTCACAAAAATTTG 199626
|| |||||||||||
Sbjct 54377 CTTGACAAAAATTTG 54391
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTC 199479
||| ||||||||||| || |||||||| | |||||||| | || || || ||||||||
Sbjct 53501 GACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTC 53560
Query 199480 CAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTG 199539
||| ||||| ||||| || || | | ||| ||||| ||| ||| ||||| || ||
Sbjct 53561 CAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTG 53620
Query 199540 AATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599
||| || ||| ||| || | ||||| | | ||| || |||| || || |||||
Sbjct 53621 AATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTT 53680
Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || ||||| || ||
Sbjct 53681 ACCAGTCAGCGTCTTAACAAAGATCTG 53707
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || |||||||||| ||||||||||| || ||| || ||
Sbjct 469427 TCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCC 469368
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 469367 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 469308
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | ||||| | | ||| || || | || ||
Sbjct 469307 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 469248
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || || ||||||||
Sbjct 469247 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 469215
>seq9
Length=442403
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 64029 TCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 63970
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 63969 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 63910
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 63909 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 63850
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 63849 GGTCTTACCAGTCAAAGTCTTGACAAAA 63822
>seq11
Length=679893
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | || | ||| || |||||||||| ||||||||||| ||||| || ||
Sbjct 629561 TCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCC 629620
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| ||||| ||||| | | || ||||| || || |||||
Sbjct 629621 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 629680
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || || || |||||
Sbjct 629681 ATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGAT 629740
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 629741 GGTCTTACCAGTCAAAGTCTTAACGAA 629767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921343216139
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |