Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 250 3e-61 seq9 154 2e-32 >seq5 Length=553973 Score = 250 bits (276), Expect = 3e-61 Identities = 836/1282 (65%), Gaps = 52/1282 (4%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | || || |||||||| |||| ||| ||||||||| ||||||| | | || Sbjct 294126 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 294185 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | |||||||| || ||| | || ||||||| |||| | | |||||||| || || Sbjct 294186 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 294245 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTAT 111898 || ||||||||||| || | || |||||| || | | | ||| || || || Sbjct 294246 AAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTC-AACTGGTTCTTACAT 294304 Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958 | |||||||| ||| || | || | ||||| ||| |||| || ||||| ||| Sbjct 294305 TGCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAACAC 294364 Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC------TATCT 112012 || || ||||| |||| | ||| | ||| || || ||| | || || Sbjct 294365 CGCCCGTTATGTCGACCAGGGTGG---TAACAAAAGACCTGGCGCCTTTGCCCTGTACCT 294421 Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072 || |||||||| || ||||| | || || |||| | | ||||| ||| | || Sbjct 294422 GGAACCATGGCATGCTGATATTTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGA 294481 Query 112073 GGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 112131 || || ||| | ||| | || | ||||| |||||||| ||||| ||||||||| Sbjct 294482 AGAAATTCG-TGCAAGAGATTTGTTTCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 294540 Query 112132 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GCACCCGGTCTCTCC 112190 | || || |||| ||| | |||| || | || | |||| ||| || || ||||| | Sbjct 294541 GTGTCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCTGGTCTAAGC 294599 Query 112191 GATGCCGTG--GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG 112248 || | || || || ||||||||||| || || || ||||| ||||| |||| | Sbjct 294600 GA--CTGTTACGGCGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG 294657 Query 112249 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 112308 | ||| | ||| | | ||| | | ||| | | | ||||| || | Sbjct 294658 ---GTAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAA 294714 Query 112309 CTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 112368 | |||||||| | | | |||| ||||| || || ||| |||| ||| ||||| || | Sbjct 294715 CGGGTACACCTTTTGTCGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACT 294774 Query 112369 TGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 112428 | ||||| |||||| || ||| | || ||||| | || | ||| || | Sbjct 294775 TAGGTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACG 294834 Query 112429 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA- 112483 | || ||||| |||||| | || || | || | || || || || | | |||| Sbjct 294835 AAACTGCTGTTTGTAACTTGGCTTCTGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAG 294893 Query 112484 ----GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACA 112535 | |||| |||| | | ||||| | |||||| || | ||| ||| || Sbjct 294894 GACGGCCAAACTTCTACATACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACT 294953 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCT 112595 || ||||||||||||||||| | |||| ||||| ||||| || | | ||| Sbjct 294954 CGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAGATCC 295013 Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTT 112655 ||||||||||| | ||||||| | | ||||| |||||| | || || |||| Sbjct 295014 AATATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTTTGGCTGACACTTTCA----- 295068 Query 112656 TGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710 ||| || ||| | |||||||| || || || | | ||| | || |||| Sbjct 295069 TGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTTG 295128 Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCAT 112770 | ||||| ||||| ||| || | || || || || | || | || || |||| Sbjct 295129 AAACAATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGACCAT 295188 Query 112771 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAG 112830 | |||||||| | |||||||||||||| ||||| | ||||| || |||||||||| | Sbjct 295189 ACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-AC 295247 Query 112831 GTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 | ||| | || | || ||||| || | | | || ||| | || | ||| Sbjct 295248 CAAAAACCCTACGGCATGTGGGATTGGGATACTTTGAGGAAAGATGTCATGAAGCATGGT 295307 Query 112890 CTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 112947 || | ||| ||||| |||||||||||||| || || ||||| | ||||| |||| Sbjct 295308 ATTAGAAAC--TCTTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGG 295365 Query 112948 GTAATAATGAATGCTTTGAACC 112969 || |||||||||| |||||||| Sbjct 295366 GTTATAATGAATGTTTTGAACC 295387 >seq9 Length=442403 Score = 154 bits (170), Expect = 2e-32 Identities = 832/1310 (64%), Gaps = 46/1310 (4%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 |||||||| ||||||| | ||| || | | ||||||| | |||| || Sbjct 240739 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCA 240680 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| |||||| || || | ||||| || ||| | |||||||| || ||||| ||| Sbjct 240679 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGAT 240620 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAAC 111724 ||||| || |||| ||| | |||||| | ||| |||| ||||| | ||||| Sbjct 240619 TCTGTGCTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAAC 240561 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | | || ||||||||||| ||| ||||||||||| |||||||| ||||| | || Sbjct 240560 CTTATTTAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAA 240501 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||| || || || | || ||||| | ||| | | |||||||| || || ||| Sbjct 240500 GGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGAC 240441 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAG 111903 || |||||| | || | || || | | || | || ||| | ||| ||| | Sbjct 240440 TGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCC-ACAGGTTCTTATATCGCCG 240382 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || ||| ||| |||| | ||||| ||| |||| || || ||| || || | Sbjct 240381 GTACCAACGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTC 240322 Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGT-----CTATCTT-GAGC 112017 | ||||| ||||| || | |||| || || || | | |||| || | Sbjct 240321 GTTATGTGGACCAA---GGAGGCAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAAC 240265 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 |||||||||| |||||| | || || | || | | | ||| ||| | || || Sbjct 240264 CATGGCACGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAA 240205 Query 112078 CGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | |||| | ||| | ||| | ||||| |||||||| || || || ||||| | ||| Sbjct 240204 TTC-GTGCAAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTT 240146 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCC 112196 | ||| ||| ||| || | |||| ||| || || ||| | |||| | Sbjct 240145 CAAGAGGATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTC 240086 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 |||||| || ||||||| || || || ||||| ||| |||| | | Sbjct 240085 TGGGGTGATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAA 240029 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTAC 112315 || | ||| | | ||| | || ||| | |||| | ||||| || || ||||| Sbjct 240028 ACCATTAAAGCCCAAAAGTTATGGTATGCCATTTTACAAG-CACAAACAGAAACAGGTAC 239970 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 ||| | ||| ||||||| ||||| |||||| ||||| || ||| |||| |||||| Sbjct 239969 ACCTTTCATGGTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTAC 239910 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 || || |||||| | ||| |||||| | || | | | | |||||| || || Sbjct 239909 CATTAAATCATCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGC 239850 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA-- 112491 || ||||| || || || || || ||||| || || || || ||| | | |||| Sbjct 239849 CGTTTGTAATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGATG 239794 Query 112492 ---------CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAA 112539 || | | ||| || | | || ||| || | ||| | || | | Sbjct 239793 GTAAAACTGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTCATTACCCATA 239734 Query 112540 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATA 112599 || | |||||||| || || | |||| ||| || ||| || | || || |||| Sbjct 239733 ACTTGAACAGAGTCATCGACCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATA 239674 Query 112600 TGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT--GTAT-TCATTCTTT 112656 |||| || | || |||| | ||||| |||||||| || ||| ||| | || || Sbjct 239673 TGAGGCATAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGCTGC 239614 Query 112657 GTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAA 112716 ||| || | ||||| || || ||||| | | || | || || || || | Sbjct 239613 GTCTCC---CTTTTGAATCAGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCA 239557 Query 112717 TGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAA 112776 | ||||| || ||||||| || | || |||||| || || ||| ||| | Sbjct 239556 TTTATCATGCTACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCTA 239497 Query 112777 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG 112826 | || || ||||||||||| || | || | || |||||||| |||||| Sbjct 239496 CTTTCGAAGGTTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGG 239447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240