Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 280 2e-70 seq9 250 3e-61 seq2 84.2 3e-11 >seq5 Length=553973 Score = 280 bits (310), Expect = 2e-70 Identities = 900/1382 (65%), Gaps = 36/1382 (3%) Strand=Plus/Minus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 |||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||| Sbjct 295387 GGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCC 295328 Query 106013 ATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070 || ||||| ||| | || ||| | | | ||| || | | | | |||||| | Sbjct 295327 ATGGTCAAAGA--GTTTCTAATACCATGCTTCATGACATCTTTCCTCAAAGTATCCCAAT 295270 Query 106071 CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 | | || | || || ||||||||||| || ||||| | ||||| || | | Sbjct 295269 CCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCTG 295210 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 ||||||| | || || || || | || | || ||| | |||||| || |||| Sbjct 295209 GAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCCA 295150 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 || || ||||| || ||||||||||| | ||| | ||| || || |||| Sbjct 295149 TAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAAT 295090 Query 106251 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 106310 |||| | | || ||| || || || || | |||||||||||||||| |||| | Sbjct 295089 CAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATTG 295030 Query 106311 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 106370 |||| |||| |||||| || ||| ||| ||||| || || |||| | ||||| | Sbjct 295029 GTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATAA 294970 Query 106371 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAAT 106424 ||| ||||| ||| ||||||| || | ||||| || || ||||| | || Sbjct 294969 CTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTATG 294910 Query 106425 CAAAAGTGCGA--GTC-TCT------TCATTGACATACTTTGGAAGGGCGATTGATGCCA 106475 | |||| | ||| ||| ||| ||| || ||| | ||| | || |||| Sbjct 294909 TAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTGGCAAGGCAACAGAAGCCA 294853 Query 106476 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGG 106535 | || |||||||| || || ||| | ||| |||||| | |||||| || ||||| | Sbjct 294852 AGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTTG 294793 Query 106536 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGA 106595 | ||| || || || || ||||||||| |||| ||||||| ||||| || || | Sbjct 294792 ATGACTTGATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAAA 294733 Query 106596 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCG-GCG 106654 | | || || ||||| || || |||| | | ||| | | ||| | | | | Sbjct 294732 CGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAG 294673 Query 106655 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || ||||| || | || || || ||||| || || || ||||||||| Sbjct 294672 CCTT----AATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAAC 294617 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT-TGTCTGGACAGAAAAGAGACCATTG 106773 || || || |||| ||||| || || ||| |||| |||| | || ||| Sbjct 294616 TCGTCGCCGTAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAGT 294558 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 ||| ||| || || |||||||||||||| || |||||||| || | | ||| | ||| Sbjct 294557 CCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGAAACAAATC 294498 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 ||| ||| ||||| | ||| ||||| || | |||| || || | ||||| Sbjct 294497 TCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATC 294438 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949 || |||||||| || || || | || | | || |||| | || | | || | Sbjct 294437 AGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGTTACC-ACCCTGGT 294379 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 ||||| || || ||| ||||| || |||| ||| ||||| | || | || || Sbjct 294378 CGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTAC 294319 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 | ||||| || ||| ||| | | | | | || |||||| || | ||||||| Sbjct 294318 CGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATAC 294259 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | ||||| || || || ||||| || | | ||| | || ||||| | ||| | Sbjct 294258 CACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAG 294199 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189 |||||||||| |||||| | ||| ||| |||||| || ||| |||| |||||||||| Sbjct 294198 AGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCAT 294139 Query 107190 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTCC 107248 | || | ||||| | || ||| | || || || | ||||| || ||||| || Sbjct 294138 TAAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTCT 294080 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308 | | | || |||||| ||||||||||| | || || | ||||| | || ||| Sbjct 294079 AGAGCCGCCTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGT 294020 Query 107309 GG 107310 || Sbjct 294019 GG 294018 >seq9 Length=442403 Score = 250 bits (276), Expect = 3e-61 Identities = 802/1230 (65%), Gaps = 32/1230 (3%) Strand=Plus/Plus Query 106096 CCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGA 106155 |||||| |||||||| || | || | || | |||||||| || || || ||| Sbjct 239447 CCACATGTCAAATTGTAGAATACCCTTAGAGGCTGGAGAACCTTCGAAAGTAGAATACTT 239506 Query 106156 ACCTTGGGCTTCAG--CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 ||||| |||| | ||||||||||| || || || | || ||||| |||||||| Sbjct 239507 ACCTTC--CTTCTGTGCCAATTCACAGGAGGCTTCAAGAGTAGCATGATAAATGGTTTCG 239564 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAAT 106272 || || | |||| | ||||| ||||| ||||| | | || ||| || || Sbjct 239565 AAAATCTGTTTGTTCAAAGTTTGAGCTTCTTCTGATTCAAAAGGG-AGACGCAGCATCAT 239623 Query 106273 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 106332 | | ||| || ||||||||||||||||| |||||||||| || | |||||| || || Sbjct 239624 ATAGGTATCGGCCAGACCTTGAACACCCAAGGCAATAGGTCTATGCCTCATATTTGAATT 239683 Query 106333 TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 || || ||| |||||| |||| | ||| ||||||| ||| | || | ||||| Sbjct 239684 TCTGGCTTCAGGAACTGGATAATAATTACGGTCGATGACTCTGTTCAAGTTATGGGTAAT 239743 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT------CTTCA-- 106444 | || | |||||||| | | || ||| | || | ||| | ||||| Sbjct 239744 GACTTTAGCAATTTCATGTAAACTCTCGAAATTATAACTTGCAGTTTTACCATCTTCAGA 239803 Query 106445 ----TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTT 106500 | |||| | ||| ||||| || || || | ||| ||||| || || ||||| Sbjct 239804 CATCTCGACAAATGCTGGGAGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGG 239863 Query 106501 ATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTT 106560 | ||||| | ||||| |||||||||||| ||||| || ||||| |||| Sbjct 239864 GGAAGAATACTCGACGATTTCACAACACAAGTTGGATGATTTAATGGTACCCAAGTTCTG 239923 Query 106561 TTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGT 106620 |||||| ||||| |||| || || |||||||| | |||| | || || || || || || Sbjct 239924 TTGGTTTGTCTTTCTGTTACATGCGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGT 239983 Query 106621 CTGTGACTTG-AGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTC 106679 |||| |||| | ||| || | ||| | | ||| | ||||| || | || | Sbjct 239984 TTGTG-CTTGTAAAATGGCATACCATAACTTTTGGGC---TTTAATGGTTTTACCACGAC 240039 Query 106680 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 106739 | ||| ||||| || || || ||||||| || |||||| | || | || Sbjct 240040 CTTCCCTTTCGTAACGGGTATATAGCTCTTCAAATTCATCACCCCAGACATCATCTAAAC 240099 Query 106740 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 106799 |||| || ||| | || | || ||| | ||| |||| | ||| || ||||| | Sbjct 240100 CTGGGGCAGCACTGGGAGAAAATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAA 240159 Query 106800 AAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTT 106859 ||||||| ||||||||||| | | || | ||| || ||| ||||| | ||| | Sbjct 240160 AAAGGTCAGGAATCCACAGAGCAGGGAATAAATCCCTTGCACGAATTTCTTCTTTACCAT 240219 Query 106860 GGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAGATAGACT 106918 || | || | || | || || | |||||| ||||||||||| | ||||| | | Sbjct 240220 GGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCGTGCCATGGTTCCAAGA-AAAGG 240278 Query 106919 GCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | | || || | | | || |||| | ||||| || || || ||| || Sbjct 240279 GCAAAGGCACCAGGTCTCTTGTTG-CCTCCTTGGTCCACATAACGAGCAGTATTGTTGAA 240337 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 107034 || |||| ||| ||||| | |||| ||| ||| || || || ||| ||| Sbjct 240338 AACACGAATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACC 240397 Query 107035 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 107094 ||| | | | | || || | |||| ||| || || ||| || || || Sbjct 240398 TGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGC 240457 Query 107095 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 107154 ||| || | | ||| |||| ||||| | || ||||| ||||| |||| || ||||| Sbjct 240458 ACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAA 240517 Query 107155 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214 || ||||| || || ||| |||||||| || || | |||||| | |||||| | Sbjct 240518 ACATGAAGACATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGT 240577 Query 107215 GAACATACCTT-GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273 ||| ||| ||| |||||| | ||| |||| || |||||||| || || |||| Sbjct 240578 GAA-ATATCTTAATGACATCAAATTGTAGGTCTTCAGCACAGAATCGATATCACTACCGT 240636 Query 107274 GGATGCCGATGGCCACACGCATAAACATGT 107303 |||| || | ||||||||||||| || || Sbjct 240637 GGATACCTAGCGCCACACGCATAACCAAGT 240666 >seq2 Length=800085 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 || ||||| |||| ||| |||| || || || ||||| ||||||||||| ||||| Sbjct 713137 TACGGTCGCATTGCGCCAAGATCAGGCCTAGCAGTGAAAAATGGTATTCAAACCGGTGCT 713196 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163 |||||| | || || || || |||||||| ||||| || | ||||||||| | | Sbjct 713197 GGTGTTGTCGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACAG 713256 Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202 | ||| || | | || ||||| |||||| | || ||| Sbjct 713257 AGAGATTTCGCCATCAAAAAAGGTGATCGCGTAGCCCAA 713295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080