Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 1e-15 >seq13 Length=926729 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | |||||| | || ||||| || || |||||||||||||| || ||||| | Sbjct 619492 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 619551 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || |||| || ||||| || || ||||||||||| ||| ||| ||| || ||| Sbjct 619552 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGTGTGTCTAAAGACCGCTTAGGG 619611 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || | || | | || || || || ||||||||||| || |||| | || || ||| Sbjct 619612 AAAACGGCCTTGCGGTTGGCCCTCCAAACTAGAGAGCAACACATCAAGCGTGATAAGGCA 619671 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || || || || || || ||||| || |||||||| Sbjct 619672 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 619710 Score = 98.7 bits (108), Expect = 1e-15 Identities = 313/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 |||||||| || ||| ||| || ||||||||||| |||| |||| ||||| || | Sbjct 620356 ATCACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 620415 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || || || |||| | | ||| || | || || | | | || ||||| Sbjct 620416 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTCACCGTAACATATGT 620475 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || |||||||| || ||||| || || || | ||||| || ||||| Sbjct 620476 TTAATCCCCGTTTCCGCACATGGTACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 620535 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | ||||| | || | || || ||| || Sbjct 620536 GTTGTTCCTGTCAACTGTTTACAAGATGGTTCTTTGGATCTGGTTGACTTAAAGACCAAG 620595 Query 159517 GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGT 159576 || | | || | ||||| | | ||||| || ||||| ||||| | ||| Sbjct 620596 GCTGAAAAGCATTCTAAAGAACTAGCGGCCGTAATGATCACCTATCCTTCTACTTACGGT 620655 Query 159577 GTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGTCAGGT 159635 |||||||| || ||| ||| | ||| | || || ||| |||||| || || Sbjct 620656 TTATTTGAACCAGGCATTCAACATGCTATCGAT-ATCGTGCATTCTTTTGGTGGGCAAGT 620714 Query 159636 ATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGG 159695 ||| | |||||||| ||| | || || ||||| || ||| | ||| | || ||| Sbjct 620715 CTATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGCTAACTTCACCTGGAGATCTTGG 620774 Query 159696 TGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGG 159755 ||||||||| || || | || || || |||||||| | || || ||||| || || || Sbjct 620775 TGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGGTGGCGGTGG 620834 Query 159756 TCC 159758 ||| Sbjct 620835 TCC 620837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120