Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 seq12 86.0 7e-12 >seq13 Length=926729 Score = 127 bits (140), Expect = 2e-24 Identities = 158/216 (73%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| | | |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 489042 CCAGAAATGTTAGGAGGAAGAGTGAAGACTTTACATCCAGCCGTTCATGGTGGTATTCTT 488983 Query 151039 GCACAACGAGGTAATTCTAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAACCGATT 151098 || ||| || |||| |||| |||| | |||| | | | |||||| || Sbjct 488982 GCTA---GAGATATCGATAGTGATGAGAAAGATTTGAAGGAACAGCACATTGAAAAAGTT 488926 Query 151099 GATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGTAACT 151158 ||| || | | ||| | |||||||| |||||||||||||| || ||||||||| Sbjct 488925 GATTACGTCGTTTGTAACTTGTATCCATTCAAAGAAACTGTTGCCAAGGTAGGTGTAACC 488866 Query 151159 CTTGCAGAAGCAATTGAGAATATTGACATTGGTGGT 151194 || ||||||| | ||| | ||||||||||||||| Sbjct 488865 ATTCCAGAAGCTGTAGAGGAAATTGACATTGGTGGT 488830 >seq12 Length=1026045 Score = 86.0 bits (94), Expect = 7e-12 Identities = 170/248 (69%), Gaps = 9/248 (4%) Strand=Plus/Minus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| || | || ||||| |||||| | || || |||||| ||||||||| Sbjct 190882 CCAGAAATGCTAGGGGGTAGAGTGAAGACTCTTCACCCTGCTGTTCATGCAGGTATTCTT 190823 Query 151039 GCACAACGAGGTAATTCTAGTC--ATGATTTAGATCTTAAGGTAAATCGTATTGAACCGA 151096 || ||| | || || | || ||| | |||| | | | ||||| | Sbjct 190822 GCC-----AGGAATTTAGAGGGCGACGAAAAGGATTTGAAGGAACAGCACATTGATAAGG 190768 Query 151097 TTGATATTGTTGC-TGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGTA 151155 | ||| |||| | ||||| | |||||||||| ||||||||||| |||||| ||||| Sbjct 190767 TGGATTTTGTCGTATGTAATC-TATATCCATTCAAAGAAACTGTGGCTAAAATTGGTGTT 190709 Query 151156 ACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCAGCA 151215 || || |||||| | ||| | ||||| ||||||||| | | || ||||| | || Sbjct 190708 ACAGTTCAAGAAGCCGTGGAGGAAATTGATATTGGTGGTGTGACTTTGTTAAGAGCTGCT 190649 Query 151216 GCAAAGAA 151223 |||||||| Sbjct 190648 GCAAAGAA 190641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847876144800