Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq12 95.1 8e-15
>seq12
Length=1026045
Score = 95.1 bits (104), Expect = 8e-15
Identities = 164/237 (69%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 34747 AATCATTT-CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
||||| || || ||||||||||| || |||| ||| | ||| ||| || ||||| ||
Sbjct 53475 AATCAATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTG 53534
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
||||| || | ||| |||| ||||| || || |||||||| || | | || |||
Sbjct 53535 TAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGG 53594
Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCG 34925
||| | || | || ||||| || ||| ||| |||||| | |||| ||
Sbjct 53595 TCTGGAGGAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAA 53654
Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || || | || ||||| || || || || ||||| |||||||||||||||
Sbjct 53655 GATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 53711
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| ||||| |||||||| | || ||| || ||||| || ||||| ||
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| ||| |||| || || || || |||||||| || | | || |||||| | ||
Sbjct 54000 AACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 54059
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || ||||| || ||| ||| |||||| | |||| || | || ||
Sbjct 54060 ATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACC 54119
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | || ||||| || || || || ||||| |||||||||||||||
Sbjct 54120 TCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 54167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633532739976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |