Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq10 161 1e-34 >seq10 Length=729272 Score = 161 bits (178), Expect = 1e-34 Identities = 372/557 (67%), Gaps = 9/557 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| || |||||||| || || |||||||| ||||| | |||||||| ||||| Sbjct 390339 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 390280 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| || || ||||| | |||||| || || | ||| || || | || || || || Sbjct 390279 AAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 390220 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || ||||| | |||||| | | ||||| || || || | | ||| || | | Sbjct 390219 GAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 390160 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCA---ATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 390159 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTC---TCACCGATTTCTGGGATGGTG 390103 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | ||| | |||| | | || | || || ||||| || | Sbjct 390102 TGAATGGCATTGAACAAAAATTCACTTTCCTTAGGGTCCTTAATGTAGGTATCGATCAAC 390043 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || ||||||| |||||||||||||| || || |||||||| |||| | | Sbjct 390042 AAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTT 389983 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | |||||| ||| | | || | | | | |||||||||||||| || || Sbjct 389982 GCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 389923 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| |||||| ||| || | | || || Sbjct 389922 TCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATT 389863 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTT 37700 | || |||||||||| |||||| || || ||||||| ||| ||| ||||||| ||| | Sbjct 389862 CTGTTGTTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAT 389803 Query 37701 GCCAATGCACGTTTATA 37717 || ||||| ||||| Sbjct 389802 GCTTCGGCACGCTTATA 389786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316674132680