Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq9 95.1 9e-15
seq11 84.2 2e-11
>seq9
Length=442403
Score = 95.1 bits (104), Expect = 9e-15
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| || || |||| ||| ||||||||||| ||||| ||||| | ||| | ||||
Sbjct 64026 CAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 63967
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| |||||||| ||||| |||| || ||||| || | || | || ||||||||
Sbjct 63966 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTC 63907
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||||| || ||| | | || || || | || || |||| || || ||
Sbjct 63906 TTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 63847
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAA 48758
|| || |||||||| || ||||||
Sbjct 63846 CTTACCAGTCAAAGTCTTGACAAAA 63822
>seq11
Length=679893
Score = 84.2 bits (92), Expect = 2e-11
Identities = 92/121 (76%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || |||| | ||| |||||||||| ||| || ||||| || ||||| ||||||
Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGG 48658
| | ||| |||| ||||| |||||||||||||| |||| || ||||| || |||||
Sbjct 629610 AAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 629669
Query 48659 A 48659
|
Sbjct 629670 A 629670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937521074491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |