Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 >seq13 Length=926729 Score = 107 bits (118), Expect = 2e-18 Identities = 315/483 (65%), Gaps = 2/483 (0%) Strand=Plus/Minus Query 138204 GGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCT 138263 ||||| || || ||||| || || | |||||||| || ||||| | || || |||||| Sbjct 620837 GGACCACCGCCACCATGAGGGATGGAAAATGTCTTGTGCAAATTCAAGTGGCAGACATCT 620778 Query 138264 GCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGA 138323 |||||| || | ||| | ||| || ||||| || || | ||| |||||||| | | Sbjct 620777 GCACCAAGATCTCCAGGTGAAGTTAGCCCAACCTGCGCGTTCATATTAGCACCATCCAAA 620718 Query 138324 TATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAA 138382 || || || |||||| ||| ||||| | ||| | ||| ||| || |||||| Sbjct 620717 TAGACTTGCCCACCAAAAGAATGCACGAT-ATCGATAGCATGTTGAATGCCTGGTTCAAA 620659 Query 138383 TACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTTCAAATGTATTCATGAT 138442 || ||| | ||| || ||||| || ||||| | | ||||| | || | | Sbjct 620658 TAAACCGTAAGTAGAAGGATAGGTGATCATTACGGCCGCTAGTTCTTTAGAATGCTTTTC 620599 Query 138443 TGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTAC 138502 || || ||| || || | || | ||||| | ||| |||||| || Sbjct 620598 AGCCTTGGTCTTTAAGTCAACCAGATCCAAAGAACCATCTTGTAAACAGTTGACAGGAAC 620539 Query 138503 AACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTAT 138562 |||||||| || |||||| | ||| ||| ||||| || |||||||| || | || || Sbjct 620538 AACTTTCAAACCCGCCATGGCAGCAGAAGCTGGATTTGTACCATGTGCGGAAACGGGGAT 620479 Query 138563 CAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAG 138622 | ||||| || | | | || || | || || | | |||| || || Sbjct 620478 TAAACATATGTTACGGTGACTTTCACCCTTGCTTTCCAAGTAAGATCTGATTACTCTCAA 620419 Query 138623 TCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGT 138682 || | || ||||| |||| |||| ||||||||||| || ||| ||| |||||||| Sbjct 620418 ACCGGTGTATTCACCTTGTGCACCTGAATTAGGTTGTAAAGAAATACCATCGAAACCTGT 620359 Query 138683 GAT 138685 ||| Sbjct 620358 GAT 620356 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 || ||||| || || || || || ||||| || || | | || || ||||||||| Sbjct 619700 AGAGCTTGAGCGGTACAAATATTTGAAGTTGCCTTATCACGCTTGATGTGTTGCTCTCTA 619641 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430 ||||| || || || | | || | || ||| || ||| ||| ||| |||||| Sbjct 619640 GTTTGGAGGGCCAACCGCAAGGCCGTTTTCCCTAAGCGGTCTTTAGACACACCGACAATT 619581 Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490 ||||| || || ||||| || |||| || | ||||| || |||||||||||||| Sbjct 619580 CTGCCTGGAATTTTTCTATTTAACTTATCAATGACAGCAAAAAAGGCAGCATGAGGACCA 619521 Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519 || || ||||| || | |||||| | ||| Sbjct 619520 CCATAACCCATTGGGACACCAAATCGTTG 619492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998276962840