Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 331 1e-85
seq9 232 8e-56
seq2 84.2 3e-11
>seq5
Length=553973
Score = 331 bits (366), Expect = 1e-85
Identities = 902/1368 (66%), Gaps = 36/1368 (3%)
Strand=Plus/Plus
Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286
||| | |||||| | ||||||||||| |||||| || | | | || ||||| ||
Sbjct 294033 ATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAGGCGGCTCTAGAAACATATAAC 294092
Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345
||||| | || || || | ||| || | ||||| | || ||||||||||| ||
Sbjct 294093 TTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCC 294151
Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405
|| ||| || |||||| ||| ||| | |||||| ||||||||||| ||| | |||||
Sbjct 294152 AAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTAT 294211
Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465
|| | ||| | | || ||||| || || || ||||| |||||||| | ||
Sbjct 294212 TTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 294271
Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525
|||||| || | | | | | ||| ||| || ||||| ||| || | ||
Sbjct 294272 TATCCATAATATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACCTCTAACGG 294331
Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585
| ||||| ||| |||| || ||||| ||| || || ||||| | || | | ||
Sbjct 294332 GTTAATTCCCATGATTCGTGTTTTTAATAACACCGCCCGTTATGTCGACCAGG-GTGGTA 294390
Query 75586 TCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641
| ||| || || | || | ||| |||||||||||||||| ||||| | || |
Sbjct 294391 ACAAAAGACCTGGCGCCTTTGCCCTGTACCTGGAACCATGGCATGCTGATATTTTTGATT 294450
Query 75642 TCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCAT 75701
| |||| | || ||||| ||| | ||||| ||| |||||| | ||| |
Sbjct 294451 TTATTGATATCAGAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTG 294510
Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761
| || |||||||| || |||||||||||||| || || ||| ||| ||| || | |
Sbjct 294511 CTCTATGGATTCCCGATCTTTTCATGAAGCGTGTCGAAGAGAATGGGACTTGGACTTTGT 294570
Query 75762 TCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTC 75820
||| |||| ||| || || ||||| |||| || || ||||||||||| ||
Sbjct 294571 TCTCTCCA-ACAGCCGCTCCTGGTCTAAGCGACTGTTACGGCGACGAGTTTGAAGCTCTA 294629
Query 75821 TACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TG 75879
|| || || ||| | || ||| | | || | | | || | | | || ||
Sbjct 294630 TATACCCGCTACGAAAAAGAAGGTCGTGGTAAGACCATTA----AGGCTCAAAAATTATG 294685
Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939
| | | ||| | || |||| || || || || ||||| | | | |||| || |||||
Sbjct 294686 GTATTCCATTTTGGAAGCACAAACTGAAACGGGTACACCTTTTGTCGTTTATAAAGATGC 294745
Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999
||| |||| ||| ||||||||| || || || |||||| ||||| | |||
Sbjct 294746 TTGCAACAGAAAGTCTAACCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 294805
Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059
|||||| | |||||| ||| | ||| || || |||||||| || ||||| || | ||
Sbjct 294806 TGAAATTGTTGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCTGTTGC 294865
Query 76060 CCTTCCAAAGTATGTCAATGAA------GAGACTCGC---ACTTTTGATTA-----TGAA 76105
| | ||| || ||| |||| ||| || |||| | || | ||
Sbjct 294866 CTTGCCAGCGT---TCATTGAAACGTCAGAGGACGGCCAAACTTCTACATACAACTTCAA 294922
Query 76106 AAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164
||| || || ||||| | || ||||||| ||| ||||| |||| ||||| | ||
Sbjct 294923 AAAATTACACGAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAA 294982
Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224
|| || || ||||| ||| ||| || |||||| |||| ||||| |||| ||||||
Sbjct 294983 TTACTACCCTGTTGAAGAAGCGAGAAGATCCAATATGAGACATAGACCAATTGCTTTGGG 295042
Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284
|||||||||| | || || || || ||| || | | |||||||| || || ||
Sbjct 295043 TGTTCAAGGTTTGGCTGACACTTTCATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGC 295102
Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344
| | ||| | ||||||||||| || ||||| || || |||| || |||
Sbjct 295103 CCGTTTACTAAATATCCAAATCTTTGAAACAATTTATCATGCCTCTATGGAAGCTTCTTG 295162
Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404
|||| | ||| || | || | || || || || | |||||||| || || |||||
Sbjct 295163 TGAACTAGCTCAAAAGGACGGACCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGG 295222
Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCT 76464
| |||||||| ||||||||||| || || | || | || |||||| | |
Sbjct 295223 TATACTTCAGTTCGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGATACTTT 295282
Query 76465 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 76522
| | || ||| | || | ||| || | ||| ||||| ||||||||||||||
Sbjct 295283 GAGGAAAGATGTCATGAAGCATGGTATTAGAAAC--TCTTTGACCATGGCACCAATGCCT 295340
Query 76523 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570
|| || ||||| | ||||| |||||| |||||||||| |||||||||
Sbjct 295341 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTTGAACCA 295388
>seq9
Length=442403
Score = 232 bits (256), Expect = 8e-56
Identities = 912/1407 (65%), Gaps = 48/1407 (3%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| || || | ||||| || || | || |||||||| || || ||||||||
Sbjct 240673 CCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGATTCTGTG 240614
Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
|| |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | ||
Sbjct 240613 CTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 240555
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|| |||||||| ||| || || ||||| || ||||| || |||| ||||| ||
Sbjct 240554 TAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 240495
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| || | ||||| |||| ||| | | || ||||| || || ||| || ||
Sbjct 240494 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 240435
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||| |||| | || || | | | | ||| ||| ||| || || ||
Sbjct 240434 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 240375
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
||| ||| |||| | ||||| ||| |||| || || ||| || || || |||||
Sbjct 240374 CGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 240315
Query 75571 AAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCATG 75626
| |||| | ||| | || ||| || | || | | ||||||||||||||| |
Sbjct 240314 GGACCAAG-GAGGCAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAACCATGGCACG 240256
Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686
| |||||| | || || | || | || | ||| ||| | ||||| ||| |
Sbjct 240255 CAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAATTCGTGCAA 240196
Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746
| ||| | || | | ||||||||||| |||||||| ||||| || ||| | |||| ||
Sbjct 240195 GGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGGATG 240136
Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806
| | ||| || | || | ||| || |||||| | || | |||||| |
Sbjct 240135 GGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTGATG 240076
Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866
| ||||||| || || || || ||| ||| ||| | | || | | | | |
Sbjct 240075 AATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTGGTAAAACCATTAAA---G 240019
Query 75867 CCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATG 75925
|| | | ||| ||| | || ||| | || |||| || || || || ||||| | |||
Sbjct 240018 CC-CAAAAGTTATGGTATGCCATTTTACAAGCACAAACAGAAACAGGTACACCTTTCATG 239960
Query 75926 CTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGC 75985
|||||||||| || ||||||| |||| |||||| |||| ||||| || || ||
Sbjct 239959 GTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTACCATTAAATCA 239900
Query 75986 TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045
|| || | || ||||| | ||||| | ||||| || || ||||| |||
Sbjct 239899 TCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGCCGTTTGTAAT 239840
Query 76046 TTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAGAG------ACTCGCACT 76093
| || || || ||||| ||| | |||| | |||||| ||| | |
Sbjct 239839 CTAGCCTCTATTGCCCTCCCAGCATTTGTCGAGATGTCTGAAGATGGTAAAACTGCAAGT 239780
Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153
| | ||| || | | |||||||| | || | ||||| | || | ||| |||||
Sbjct 239779 TATAATTTCGAGAGTTTACATGAAATTGCTAAAGTCATTACCCATAACTTGAACAGAGTC 239720
Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213
|| ||| | |||| |||||| ||| || |||| || |||||| | || ||||||
Sbjct 239719 ATCGACCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAGGCATAGACCT 239660
Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGA 76272
|||| ||||||||||||||||| || ||| | ||| || ||| || | | |||||
Sbjct 239659 ATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGCTGCGTCT-CCCTTTTGA 239601
Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332
||||| ||||| | |||| | || || |||||||| ||||| || | ||
Sbjct 239600 ATCAGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATTTATCATGCTACTCT 239541
Query 76333 GGAGGCGAGTTGTGAATTGG--CTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390
|| || |||||||||| | |||| ||||| ||| || || || ||||||
Sbjct 239540 TGAAGCCTCCTGTGAATTGGCACAGAAG--GAAGGTAAGTATTCTACTTTCGAAGGTTCT 239483
Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACT 76448
|| || || | || | || || ||||| |||| |||| | || ||| | | | |
Sbjct 239482 CCAGCCTCTAAGGGTATTCTACAATTTGACATGT-GGAATGCTAAGCCATTTGGT-ATGT 239425
Query 76449 ACGACTGGGATGTTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
|| ||||| || ||| || | || |||| | | || | | | ||| ||||
Sbjct 239424 GGGATTGGGA-AACCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC--TCTT 239371
Query 76505 T--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGC 76561
| ||||| ||||||||||| ||||| || | |||| |||||| | |||| |||||
Sbjct 239370 TGACAATGGCGCCAATGCCAACTGCCTCAACTTCTCAAATTCTTGGAT-ATAACGAATGT 239312
Query 76562 TTTGAACCATACACAACAAACATCTAC 76588
|| |||||| || ||||||| |||
Sbjct 239311 TTCGAACCAGTGACTTCAAACATGTAC 239285
>seq2
Length=800085
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 27873 TTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAAC 27932
||| || | |||||| ||||| || | | || ||| | | | ||||||||| | ||
Sbjct 713295 TTGGGCTACGCGATCACCTTTTTTGATGGCGAAATCTCTCTGTGAGTGATTGAATAAGAC 713236
Query 27933 GACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAACTTGAATACCATG 27992
||||| |||||||| || || || || | |||||| ||||| |||||||||||
Sbjct 713235 TACTTTAACTTCACCAGTGTAATCTCTGTCGACAACACCAGCACCGGTTTGAATACCATT 713176
Query 27993 CTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATA 28031
||||| || || || |||| ||| |||| ||||| ||
Sbjct 713175 TTTCACTGCTAGGCCTGATCTTGGCGCAATGCGACCGTA 713137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569473228960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |