Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq9 158 4e-33
seq5 147 6e-30
seq13 113 1e-19
seq4 104 7e-17
seq15 87.8 5e-12
>seq9
Length=442403
Score = 158 bits (174), Expect = 4e-33
Identities = 223/311 (72%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
||||| || || || ||||| |||||||| || ||||| |||| | ||||||||| |
Sbjct 240300 TTGCCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAAC 240359
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
||||| ||||| || ||||| ||| |||| ||||| | || || | || | ||||
Sbjct 240360 CCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 240419
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| || ||||| ||| ||||| || | ||||| ||
Sbjct 240420 TGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAA 240479
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|||||||||||||| ||||| | ||| | | ||| | || ||| | ||| || ||
Sbjct 240480 ATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGGTGT 240539
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358
|| || |||||||| |||| || || | || ||| | ||||| |||| | ||||| |
Sbjct 240540 GGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAAT-GACATCAA 240598
Query 156359 ATCGTATGTCT 156369
|| ||| ||||
Sbjct 240599 ATTGTAGGTCT 240609
>seq5
Length=553973
Score = 147 bits (162), Expect = 6e-30
Identities = 501/775 (65%), Gaps = 12/775 (2%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTG--TATTCTACAATCTC 155644
||| ||| |||| ||||| || ||||| || | || |||| || || ||||| ||
Sbjct 294864 CAACAGAAGCCAAGTTACAAACAGCAGTTTCGTC--CGGAGCTGAGTACTCAACAATTTC 294807
Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704
|||||| | ||| || ||||||| ||||| || || |||||||| || ||||| ||
Sbjct 294806 ACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCA 294747
Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764
|||||| || || | | | || || || || || | ||||| |||| |||
Sbjct 294746 AGCATCTTTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATA 294687
Query 155765 CCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATA 155824
||| | | | || ||||| ||| | ||||| || || ||||
Sbjct 294686 CCATAATTTTTGAGCCTTAATGGTCTTACCA---CGACCTTCTTTTTCGTAGCGGGTATA 294630
Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG-GCACTTATCGGGGCAAA 155883
|| | | | || || |||||||| || || || ||||| || | | || | | |
Sbjct 294629 TAGAGCTTCAAACTCGTCGCCGTAACAGTCGCTTAGACCAGGAGCGGCTGTTGGAG-AGA 294571
Query 155884 ACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAG 155943
||| | |||| | ||| | ||||||| ||| || | ||| ||| | ||
Sbjct 294570 ACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAG 294511
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGA 156003
|| || | || ||||| || || | ||||| ||||| | | || | |
Sbjct 294510 CAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAA 294451
Query 156004 ATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG- 156062
| || |||||||| ||| ||| ||||| |||| ||||| ||| || |||
Sbjct 294450 AATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGT 294391
Query 156063 --CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATAC 156120
|||||||| || ||||| || || || ||||| || |||| | ||| ||||| | |
Sbjct 294390 TACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACC 294331
Query 156121 CATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATAT 156180
| || || || || || || || ||| | ||||||| ||| |||| |||||| ||||
Sbjct 294330 CGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATAT 294271
Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240
|||| ||||||||||| | ||| ||||| ||| ||||| || | ||| | | |||
Sbjct 294270 GTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAA 294211
Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300
|||| || ||||| || || | ||| | | | | || || | ||||||| ||
Sbjct 294210 TACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTG 294151
Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
| || ||||| || || | || || | |||||| |||| || || ||||||
Sbjct 294150 GAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACAT 294096
>seq13
Length=926729
Score = 113 bits (124), Expect = 1e-19
Identities = 209/306 (68%), Gaps = 3/306 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 426644 CCTGTCAAATCTACCAGGTCTTAGTAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 426703
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| | |||| | | |||| |||||||| | ||| || |||||
Sbjct 426704 AGCTAAGACAACAACATGGTCGGCTGGAGTAAAACCATCCATTTCTACTAACATCTGATT 426763
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || ||||| || | |||| ||| |||| | ||| |||
Sbjct 426764 CAGCGTGTTCTCTCTCTCATCGTTGGCACCTGAAAAATTACCCTTTTG---CCTAGCTTT 426820
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | ||| |||||||||||||| || | | | || | |||| ||| ||| |
Sbjct 426821 CCCTATAGCGTCAATTTCGTCAATAAACACAATCGAAGGTGCGTTTTCTCTTGCAGTCTT 426880
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||| || |||||||| | | || |||| ||||||| |||||||||||||||| ||| |
Sbjct 426881 AAACAAATCTCTTACTCTTGCAGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 426940
Query 289149 GGATAC 289154
||| ||
Sbjct 426941 GGAAAC 426946
>seq4
Length=1466838
Score = 104 bits (114), Expect = 7e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| ||| |||| ||| | ||| || ||||| | | || | |||||||||
Sbjct 209613 TTTCTTGTGGTGTTATCGTAATGGACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 209672
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || |||||| || || ||||| || ||||| |||||||||||
Sbjct 209673 TGAATATAACCTGTTTCAGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 209732
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| || |||||||| | |||||
Sbjct 209733 ATTGCGTGGAAGAAAAACTCTT 209754
Score = 95.1 bits (104), Expect = 4e-14
Identities = 133/186 (72%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826
||| |||| ||| | || ||| | || |||||| | | | || |||||| | |
Sbjct 208826 TAAGTAAACAGTCAAAGAAGGAGTTTTCATGTTTTTGGCCACATTCAAAATTTCCTTTAA 208885
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||||||||||||| || || || |||||| |||||||||||||| ||||| |||||
Sbjct 208886 ACGGGGAACACCAGAAGTAACTTT---CTTGGAAGCAACACCAGCAAAATGGAAGGTATT 208942
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946
|| || | ||| || | || |||||||| ||| || || | | ||||||||||||
Sbjct 208943 AAGTGTCATTTGTGTGGCCGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 209002
Query 301947 TCCTGG 301952
|| ||
Sbjct 209003 ACCAGG 209008
>seq15
Length=1061158
Score = 87.8 bits (96), Expect = 5e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| | ||||| | |||||| | |||||||||||| | | |||||||||||| |
Sbjct 704728 AGCACCATAGGCAATTACACAATCTCTTTCCATTTCACCCAACCTCAGACCACCATCTCT 704787
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
|| ||||||| | |||||| || ||||||| |||||||| | || | |
Sbjct 704788 GGATCTACCCTCAGTAGGTTGACGTGTCAAAACAGCCCTTGGACCACGGGCTCTTGCGTG 704847
Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417
|| |||||| ||||||||||||||
Sbjct 704848 CATCTTATCTAAAACCATATGCTTCA 704873
Score = 84.2 bits (92), Expect = 6e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||||| | |||||||||| |||||||| || ||||| ||||| | || || |
Sbjct 588423 TGGGCAACAGTCATACGAGATGGAATAGCGTGAGGATTAATGATTAAATCCGGAACAATA 588482
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || || || || |||||||| || || | ||| || | |||||||| ||||||||
Sbjct 588483 CCTTCTGCTGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 588541
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||| || || ||||||||
Sbjct 588542 ACCGTGACGAGAGGCAAATTTGTCACCAAT 588571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817279419729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |