Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq15 111 2e-19 >seq15 Length=1061158 Score = 111 bits (122), Expect = 2e-19 Identities = 209/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 172454 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 172512 ||||||||| ||||| | | |||||| || ||||||| | ||||| ||| ||||| | Sbjct 448483 AGGTGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATG-GGGTTCA 448425 Query 172513 CTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGG 172572 | || || |||| || ||||| || || |||||||||| |||||||| ||| || | Sbjct 448424 CAGATAGGAAAGTGGGGGATTTGGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGCG 448365 Query 172573 CTCAATATATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 172631 || |||| | ||| |||||| || || | ||||| || | || ||||| | || Sbjct 448364 CTAAATACAA-GACGTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAG 448306 Query 172632 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 172691 ||| ||| || | | || || | |||||| || | || | ||||||| Sbjct 448305 GTCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAAT 448246 Query 172692 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTC 172751 | || | |||| || |||| ||| || || ||||| | ||| |||||||||||||| Sbjct 448245 CCAGCTGATTTTGACAAGATGGCTCTGCCACCATGCCACATTTTCTCACAATTTTATGTC 448186 Query 172752 AG 172753 || Sbjct 448185 AG 448184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489465595960