Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 5e-19
seq9 91.5 1e-13
>seq12
Length=1026045
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 137200 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 137259
|| |||||||| | || || || ||||| |||||||| ||| || || || ||||
Sbjct 54183 AACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCT 54242
Query 137260 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 137319
|| ||||| ||||||||| |||||| | || ||||| ||||| || |||||||||||
Sbjct 54243 TCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCC 54302
Query 137320 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTC 137379
||||||| || | | || | || || | | ||| ||||| | || | ||
Sbjct 54303 TGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTT 54362
Query 137380 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| |||||||| || || || || |||||||||
Sbjct 54363 TTACCGGTCAAAGTCTTGACAAAAATTTGCATA 54395
>seq9
Length=442403
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| ||||| || | || ||||||||||| |||||||| || |
Sbjct 64040 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63981
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||| | ||| ||||||||| |||||| | ||| || || || ||
Sbjct 63980 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 63921
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| ||||| ||| ||| || | | || | ||||| | | ||| |||
Sbjct 63920 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 63861
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402
|| | ||| | ||||| || ||||| || || || ||
Sbjct 63860 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543896184400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |