Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9 194 3e-44
seq12 179 7e-40
seq11 167 5e-36
>seq9
Length=442403
Score = 194 bits (214), Expect = 3e-44
Identities = 175/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||| | ||| |||||||| || || || || ||||
Sbjct 64042 TACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 63983
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 63982 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 63923
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 63922 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 63863
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 63862 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 63823
>seq12
Length=1026045
Score = 179 bits (198), Expect = 7e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || ||||| || || |
Sbjct 53938 TACCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGG 53997
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| |||| || ||||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 53998 ATAACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAG 54057
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||||||||| || | || || || |||||||| || || ||| |
Sbjct 54058 GAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGA 54117
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| ||| || ||||| || |||| |||||| ||||| ||||||||
Sbjct 54118 CCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| ||||||||| || || || || || |||||
Sbjct 469439 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGA 469380
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
||| |||| || ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 469379 CAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 469320
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 469319 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 469260
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || ||||| || || || ||||| || || || |||||
Sbjct 469259 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 469212
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661
||||| || | ||| || || || || || || || || || | |||||||||||||
Sbjct 54186 ACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCC 54245
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
||||| || ||||||||||| | ||| |||||||||||||| || ||||| || || |||
Sbjct 54246 AGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTGA 54305
Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781
|| |||| || || || ||||| |||||| || ||| |||||||| ||||| || ||
Sbjct 54306 ATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTA 54365
Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
|| ||||| ||||| ||||| || ||||| ||
Sbjct 54366 CCGGTCAAAGTCTTGACAAAAATTTGCATAAT 54397
Score = 163 bits (180), Expect = 6e-35
Identities = 179/238 (75%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 82573 TTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632
|| |||| |||| || ||||| | | || | ||| ||||| ||||| || || ||||
Sbjct 53473 TTAATCAATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATAT 53532
Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692
| || || |||| |||| || ||||| ||||| || || ||||| || | || ||||
Sbjct 53533 TGTAGTCGGATAACGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTT 53592
Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCAT 82752
| |||||||| || ||||||||||||||||| || | || || || |||||||| ||
Sbjct 53593 GGTCTGGAGGAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGG 53652
Query 82753 TAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| ||| || |||| ||| || ||||| || |||| |||||| ||||| ||||||||
Sbjct 53653 AAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Score = 132 bits (146), Expect = 9e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661
||||| || | ||| || || || || || || || || || | |||||||||||||
Sbjct 53730 ACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCC 53789
Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721
||||| || ||||||||||| | ||| ||||| |||||||| || ||||||||||| |||
Sbjct 53790 AGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCCTGA 53849
Query 82722 ATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTT 82780
||| ||||| || || || ||||| || || || ||| || || | ||||| || ||
Sbjct 53850 ATC-TTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTT 53908
Query 82781 GCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||| || |||||
Sbjct 53909 ACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
>seq11
Length=679893
Score = 167 bits (184), Expect = 5e-36
Identities = 169/220 (77%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || ||| || || | ||| ||||| || || || || || ||||
Sbjct 629548 TACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 629607
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | |||| |||||||| | ||| || || |||||||| | ||||||||| || || |
Sbjct 629608 ATAAAGTTCTGCCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTG 629667
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||||||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 629668 GGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 629727
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||| ||||| || ||||| || ||||| ||||| || ||
Sbjct 629728 CTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 629767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826986145763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |