Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9 152 1e-31
seq4 132 1e-25
seq13 84.2 5e-11
>seq9
Length=442403
Score = 152 bits (168), Expect = 1e-31
Identities = 405/614 (66%), Gaps = 21/614 (3%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||| | || ||| | ||||| || | | || || || |
Sbjct 240739 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGACTGAACGGTGAAGTGGCA 240680
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || || ||| || || | ||||| ||| | ||||| || || |||||| |
Sbjct 240679 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGAT 240620
Query 110424 GCTGTTATTGAATGTTA-----TGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACT 110477
|||| | | || |||||| |||||| | | | | ||| ||| |
Sbjct 240619 TCTGTGCTGAAGACCTACAATTTGATGTCATTAAG-----ATATTTC-ACTCACGCTTCC 240566
Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGA 110537
|| ||| |||||||||| || ||| ||| || |||| || || || | |
Sbjct 240565 CCAACCTTATTTAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCC 240506
Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597
|| || ||||| ||||||||||||||||||||| || | |||||| |||| | |||||
Sbjct 240505 ATGAAGGATGACTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCC 240446
Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657
|| | | || || ||||| |||| || | | || || || | ||| | |||||
Sbjct 240445 AAGACTGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATC 240386
Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717
|| | || ||| |||||| ||| | |||| ||| | | || |||||| | |||
Sbjct 240385 GCCGGTACCAACGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACT 240326
Query 110718 GCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774
|| |||||| | ||||| || |||||| ||| | ||||| | | | |||
Sbjct 240325 GCTCGTTATGTGGACCAAGGAGGCAACAAGAGACCTGGTGCCTTTGCCCTTTTCTTGGAA 240266
Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834
|| ||||| ||||||| || || || | || || | |||| || || | |||||
Sbjct 240265 CCATGGCACGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGG---TAAAGAA 240209
Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGT 110891
||| | ||| | |||||||| ||| |||||||| | || | || |||||||||
Sbjct 240208 GAAATTCGTGCAAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGT 240149
Query 110892 GTTCAAGAAAATGG 110905
|||||||| ||||
Sbjct 240148 GTTCAAGAGGATGG 240135
>seq4
Length=1466838
Score = 132 bits (146), Expect = 1e-25
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| |||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 210874 GATAATGATCCAGTTCTGTTCAATCGTCAACCCTCATTGCATAAAATGTCTATGATGGCT 210815
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|| | ||| ||||| | || | ||| |||||| |||| ||| || || | | ||
Sbjct 210814 CACAGAGTGAAAGT-TATTCCGTATTCTACATTTAGATTGAATTTATCTGTTACATCTCC 210756
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
|| ||||| ||||| || || || ||||||||| | ||||| ||||| || ||| ||
Sbjct 210755 ATACAATGCCGATTTCGACGGTGACGAAATGAATCTTCATGTTCCTCAGTCTGAGGAAAC 210696
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | ||| | || || ||||| ||||
Sbjct 210695 AAGGGCGGAACTGTCCCAATTATGTGCTGT 210666
Score = 95.1 bits (104), Expect = 3e-14
Identities = 124/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | ||||| |
Sbjct 211300 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGTCAACCA--CAGGC-T 211244
Query 304944 CT-CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGT 305002
|| |||| || || | || |||| |||| | || | || ||||||||||||
Sbjct 211243 CTACAAAAGTCCGGTCGTCCCGTAAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGT 211184
Query 305003 CGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAG 305049
||||| |||||||| ||||||| || |||||||||||| |||||
Sbjct 211183 CGTATCAGAGGTAATTTAATGGGTAAGCGTGTTGATTTTTCAGCAAG 211137
>seq13
Length=926729
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 167643 TCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCA 167702
||||| || | |||||||| || || || ||| ||||| |||||||| ||||| |||
Sbjct 229376 TCGATAAAGGTCTTCCAGATCTTGATGTTACAACGACGTTTACATTCATCATAAAATCCA 229435
Query 167703 TAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAA 167746
|| |||||| | | |||||||||||| || |||||||||||
Sbjct 229436 TAAACTCTTGTAACGTTAGCACATTCGTGGTTGCCTCTTAATAA 229479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |