Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 6e-31
seq9 120 3e-22
seq11 109 6e-19
>seq12
Length=1026045
Score = 149 bits (164), Expect = 6e-31
Identities = 178/242 (74%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| ||||| | |||| ||||| |||||||| ||||||||||||
Sbjct 54168 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 54227
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || || || || || ||||| ||||| | ||| ||||| || ||
Sbjct 54228 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGA 54287
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| |||||||| || ||||||||| ||||| || | || || || ||||| ||
Sbjct 54288 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACT 54347
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTTC 134726
|| | || |||||||||||||| ||||| || || ||||||||||| ||| || |||
Sbjct 54348 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGTCTTAGTTA 54407
Query 134727 AA 134728
||
Sbjct 54408 AA 54409
Score = 143 bits (158), Expect = 3e-29
Identities = 161/213 (76%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC-AACGGTGTGAGAGTC 134560
|| || ||||| || ||||||||||||||||| ||||||||| |||| | || | ||
Sbjct 53499 AAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA-TC 53557
Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620
|| || || || || ||||||||||| | ||| || || || || || ||||| || ||
Sbjct 53558 TTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATC 53617
Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680
||||||||| ||||| ||| | |||||||| ||||| || || |||||||||||
Sbjct 53618 TTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGT 53677
Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || | || ||||| || || |||||
Sbjct 53678 CTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC- 134545
|| ||||| | || ||| || | ||| || || |||||||||||||| |||||||||
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|||| | || | || || || || || || ||||||||||| | ||| || || || ||
Sbjct 54000 AACGTTCTGCCA-TCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 54058
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| ||||| ||| | |||||||| ||||| ||
Sbjct 54059 AATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGAC 54118
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||||||||| ||||| || | || ||||| || || |||||
Sbjct 54119 CTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 54166
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| |||| ||||| | |||| ||||| |||||||| ||||||||||||
Sbjct 53712 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 53771
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || || || || || ||||| ||||| | ||| || || || ||
Sbjct 53772 AAGGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGA 53831
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || ||||| || || || ||| | |||||||| ||||| ||
Sbjct 53832 ATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACC 53891
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| |||| |||||| || |||||||||||
Sbjct 53892 TCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 127 bits (140), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | || ||||||||||| ||||||||||| | |
Sbjct 469438 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 469379
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| | | || | || || | || || || ||||| ||||| | || || || || ||
Sbjct 469378 AGAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 469320
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 469319 GATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 469260
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || ||||| || |||||||||||||| || |||||||||||||| |||
Sbjct 469259 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 469208
>seq9
Length=442403
Score = 120 bits (132), Expect = 3e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||||| |||||||| ||||||||||||||||| | |
Sbjct 64040 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 63981
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 63980 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 63922
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| ||
Sbjct 63921 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 63862
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || ||||| || || |||
Sbjct 63861 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 63822
>seq11
Length=679893
Score = 109 bits (120), Expect = 6e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | |||| |||||||||||||| ||||||||||| |
Sbjct 629550 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 629609
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 629610 AAAGTTCTG-CCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGG 629668
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 629669 GATACCTTCCTTATCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 629728
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704
|| | ||| ||||| ||||| || ||||| ||||||||
Sbjct 629729 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 629767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398292602840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |