Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 3e-27
>seq2
Length=800085
Score = 136 bits (150), Expect = 3e-27
Identities = 442/683 (65%), Gaps = 24/683 (4%)
Strand=Plus/Minus
Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTT 19305
|| || ||| |||||| ||| || |||| ||| | ||||| |||| || |||||
Sbjct 387354 GGTGGTTTGGATAAAGAATTTACTAAAATTTTTAGAAGAGCTTTTGCAAGTCGAATTTTT 387295
Query 19306 TCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGG 19364
| | ||||| || | |||| || | |||||| || | || | || ||
Sbjct 387294 CCGCCTTCAGTCATAGAAAAGCTGGGTATCTCT-CATGTTAAAGGTTTGTTATTGTACGG 387236
Query 19365 GCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAA 19421
|| |||||| ||| || || |||||||| ||| | || ||| | | || | | ||
Sbjct 387235 TCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAATGCCAA 387176
Query 19422 ACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA 19481
| | || |||||| || || ||||||||||| || | ||| || || ||| || ||
Sbjct 387175 AGAGCC---CAAAATCGTGAACGGTCCTGAAATTTTGAGTAAGTACGTTGGTTCTTCAGA 387119
Query 19482 AGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTTTAGGG 19536
|||||| | || ||| || || ||||||| |||| | || | | |||
Sbjct 387118 GGAAAATATTCGTAATTTATTCAAGGATGCTGAAGCAGAATATCGGGCCAAGGGTGAGG- 387060
Query 19537 CGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGA 19596
|| || || || || || || | |||||| |||| | | | ||||| |||
Sbjct 387059 ----AATCCTCCTTACATATCATTATTTTCGATGAACTGGATTCTGTTTTCAAGCAGAGA 387004
Query 19597 GGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAA 19650
||||| || || | || ||| ||||| ||| || |||||| | | | |||
Sbjct 387003 GGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGTAGTTAATCAATTATTAGCTAAA 386944
Query 19651 TTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAA 19710
| || |||||| | ||| ||||||||||||| |||||||| ||||| || | |||
Sbjct 386943 ATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGGTATGACCAACCGTAAGGAT 386884
Query 19711 TTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTA 19770
|||||||| || || | ||||| || ||| | || ||| | | | |||||| | |||
Sbjct 386883 TTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTCATTTA 386824
Query 19771 CCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAAT 19830
|| |||||| ||| | | ||||||| |||| || || | ||| | |||||
Sbjct 386823 CCGGATGAAAAAGGAAGACTTCAAATTTTCGACATCCAGACGAAGAAAATGAGGGAAAAT 386764
Query 19831 AACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGC 19890
|| | | | ||| ||||| | |||| || | || ||| || |||||||
Sbjct 386763 AATATGATGAGTGATGATGTTAACCTAGCTGAGTTAGCTGCGTTAACAAAAAACTTCTCT 386704
Query 19891 GGCGCAGAACTTGAGGGATTAGT 19913
|| || || |||| || |||||
Sbjct 386703 GGGGCTGAGATTGAAGGTTTAGT 386681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455917652085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |