Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2 136 3e-27 >seq2 Length=800085 Score = 136 bits (150), Expect = 3e-27 Identities = 442/683 (65%), Gaps = 24/683 (4%) Strand=Plus/Minus Query 19246 GGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTT 19305 || || ||| |||||| ||| || |||| ||| | ||||| |||| || ||||| Sbjct 387354 GGTGGTTTGGATAAAGAATTTACTAAAATTTTTAGAAGAGCTTTTGCAAGTCGAATTTTT 387295 Query 19306 TCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTATGG 19364 | | ||||| || | |||| || | |||||| || | || | || || Sbjct 387294 CCGCCTTCAGTCATAGAAAAGCTGGGTATCTCT-CATGTTAAAGGTTTGTTATTGTACGG 387236 Query 19365 GCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAA 19421 || |||||| ||| || || |||||||| ||| | || ||| | | || | | || Sbjct 387235 TCCTCCGGGTACTGGTAAGACCTTAATTGCAAGAAAGATTGGTACAATGCTGAATGCCAA 387176 Query 19422 ACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGA 19481 | | || |||||| || || ||||||||||| || | ||| || || ||| || || Sbjct 387175 AGAGCC---CAAAATCGTGAACGGTCCTGAAATTTTGAGTAAGTACGTTGGTTCTTCAGA 387119 Query 19482 AGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAA-----AACGTTTAGGG 19536 |||||| | || ||| || || ||||||| |||| | || | | ||| Sbjct 387118 GGAAAATATTCGTAATTTATTCAAGGATGCTGAAGCAGAATATCGGGCCAAGGGTGAGG- 387060 Query 19537 CGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGA 19596 || || || || || || || | |||||| |||| | | | ||||| ||| Sbjct 387059 ----AATCCTCCTTACATATCATTATTTTCGATGAACTGGATTCTGTTTTCAAGCAGAGA 387004 Query 19597 GGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAA 19650 ||||| || || | || ||| ||||| ||| || |||||| | | | ||| Sbjct 387003 GGTTCAAGAGGTGATGGTACCGGTGTAGGTGACAATGTAGTTAATCAATTATTAGCTAAA 386944 Query 19651 TTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAA 19710 | || |||||| | ||| ||||||||||||| |||||||| ||||| || | ||| Sbjct 386943 ATGGATGGTGTTGATCAATTGAATAATATTTTGGTTATTGGTATGACCAACCGTAAGGAT 386884 Query 19711 TTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTA 19770 |||||||| || || | ||||| || ||| | || ||| | | | |||||| | ||| Sbjct 386883 TTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTTGAAGTCCAAGTTGAAATTCATTTA 386824 Query 19771 CCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAAT 19830 || |||||| ||| | | ||||||| |||| || || | ||| | ||||| Sbjct 386823 CCGGATGAAAAAGGAAGACTTCAAATTTTCGACATCCAGACGAAGAAAATGAGGGAAAAT 386764 Query 19831 AACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGC 19890 || | | | ||| ||||| | |||| || | || ||| || ||||||| Sbjct 386763 AATATGATGAGTGATGATGTTAACCTAGCTGAGTTAGCTGCGTTAACAAAAAACTTCTCT 386704 Query 19891 GGCGCAGAACTTGAGGGATTAGT 19913 || || || |||| || ||||| Sbjct 386703 GGGGCTGAGATTGAAGGTTTAGT 386681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455917652085