Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5 96.9 3e-15
seq12 95.1 1e-14
seq11 86.0 5e-12
>seq5
Length=553973
Score = 96.9 bits (106), Expect = 3e-15
Identities = 392/615 (64%), Gaps = 11/615 (2%)
Strand=Plus/Minus
Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695
|| |||| ||| || |||||||| || | ||| || | ||||| || |||| ||||
Sbjct 294556 CCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGAAACAAATCT 294497
Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCC 131755
|| || | |||||| |||| | ||| | | || | ||| || ||||| ||
Sbjct 294496 CTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATATCA 294437
Query 131756 GCATGCCAGGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGA 131809
|||||||| ||||||| |||| || | ||||| |||| ||||| || ||
Sbjct 294436 GCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTG---TTACCACCCTGG 294380
Query 131810 TTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTT 131869
| |||| ||| | |||| || | || || | |||||| || ||||| | | |
Sbjct 294379 TCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTA 294320
Query 131870 CCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATA 131929
|| || || | |||||| ||| | | | || || || | | || ||||||
Sbjct 294319 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATA 294260
Query 131930 CCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCAC 131988
|| || || || ||| || || | || |||| | | ||||| || ||||| || |
Sbjct 294259 CCACCAGCAGT-TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGAT 294201
Query 131989 GCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGC 132048
|||| | ||| |||| || || |||||||||| || | | || || ||
Sbjct 294200 AGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGC 294141
Query 132049 TGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTTTTTGGCCATGCACCGATACGATTG 132108
|||||| || || ||| || ||||| |||| | ||| | ||| | ||
Sbjct 294140 ATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTC 294081
Query 132109 TATAGCGGACTCGATATCGCCCAGATGTATGGTCAATGCGACCCGCATGTACATGTGTTG 132168
|| ||| | |||||| || | || ||| || |||||| | ||| | ||||||
Sbjct 294080 TAGAGCCGCCTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTG 294021
Query 132169 AATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAAATAACCGTTTTCCAAAGTTTTGAA 132228
|| |||||| || |||| |||| | | |||||| |||||||||||| ||
Sbjct 294020 TGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAA 293961
Query 132229 ACCAAAATATTTGTA 132243
|||||| || ||||
Sbjct 293960 ACCAAAGTAACTGTA 293946
>seq12
Length=1026045
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079
|| || | ||| | ||| ||||| || | ||||| || ||||||||||||||||| | |
Sbjct 53940 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGAT 53999
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || | ||||| || || |||||||| |||| | | |||||| || || ||
Sbjct 54000 AACGTTCTGC-CATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 54058
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||| || ||||| || || || | | | || | ||||| | | ||| ||
Sbjct 54059 AATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGAC 54118
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | || || ||||| || || |||||||| ||||||
Sbjct 54119 CTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 54167
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/233 (69%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076
||| || || | ||||| || |||| || | || || || |||||||||||||||||
Sbjct 53480 ATTACCACCCCTCAACCTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTC 53539
Query 27077 -GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCG 27135
| | | ||| || | ||||| || || |||||||| |||| | | |||||| || |
Sbjct 53540 GGATAACGTTCTGC-CATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTG 53598
Query 27136 GCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTT 27195
| || | ||| || ||||| || || || | | | || | ||||| | | ||
Sbjct 53599 GAGGAATACCTTCCTTATCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATT 53658
Query 27196 CAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || ||||| || | || || ||||| || || |||||||| ||||||
Sbjct 53659 CGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCATA 53711
>seq11
Length=679893
Score = 86.0 bits (94), Expect = 5e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGT 27093
||| ||||||||||| || || || ||||| || |||||||| | | | ||| || |||
Sbjct 629564 CAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGC-CGT 629622
Query 27094 CTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTAT 27153
|||| | || |||||||| | || | | ||||| || || || | ||| || ||||
Sbjct 629623 CTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTAT 629682
Query 27154 CGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAG 27213
| ||||||| || | | || | ||||| | | ||||||||||| ||| || |
Sbjct 629683 CTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGG 629742
Query 27214 ATTTGCCCGTCAGAGTTTTCACAAAG 27239
|| || |||| ||| || || |||
Sbjct 629743 TCTTACCAGTCAAAGTCTTAACGAAG 629768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934311958904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |