Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5 309 4e-79
seq9 244 1e-59
seq2 84.2 3e-11
seq10 82.4 1e-10
>seq5
Length=553973
Score = 309 bits (342), Expect = 4e-79
Identities = 897/1368 (66%), Gaps = 36/1368 (3%)
Strand=Plus/Minus
Query 110725 TGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 110784
||||||||| |||||||||| |||||| ||||| | ||||| || || |||||||||||
Sbjct 295388 TGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGC 295329
Query 110785 CATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAG 110842
||| ||||| ||| | || ||| | || | ||| || | | | | ||||||
Sbjct 295328 CATGGTCAAAGA--GTTTCTAATACCATGCTTCATGACATCTTTCCTCAAAGTATCCCAA 295271
Query 110843 TCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902
|| | || | || || |||||||| || |||||||| | ||||| || ||
Sbjct 295270 TCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCT 295211
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962
|||||||| | |||||||| || | || | || ||| | |||||| || |||
Sbjct 295210 GGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTCC 295151
Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022
| || || ||||| || ||||||||||| | ||| | ||| || || |||
Sbjct 295150 ATAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAA 295091
Query 111023 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
||||| | | || ||| || || || || | |||||||||||||||| ||||
Sbjct 295090 TCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAATT 295031
Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142
||||| |||| |||||| || ||| ||| ||||| || || |||| | |||||
Sbjct 295030 GGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATA 294971
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCA-----TAA 111196
|||| ||||| ||| ||||||| || | ||||| || || ||||| | ||
Sbjct 294970 ACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAT 294911
Query 111197 TCAAAAGT---GCGAGTCTC------TTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247
| |||| || ||| |||| ||| || ||| | ||| | || |||
Sbjct 294910 GTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTGGCAAGGCAACAGAAGCC 294854
Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307
|| || |||||||| || || ||| | ||| |||||| | |||||| ||||||||
Sbjct 294853 AAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTT 294794
Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367
|| ||| || || || || ||||||||| ||| ||||||| ||||| || ||
Sbjct 294793 GATGACTTGATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTTATAA 294734
Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGC 111426
| | | || || ||||| || || |||| || | ||| | | ||| || | |
Sbjct 294733 ACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGA 294674
Query 111427 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486
| || ||||| || | || || || ||||| || || || ||||||||
Sbjct 294673 GCCT----TAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAA 294618
Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGC-CTTGTCTGGACAGAAAAGAGACCATT 111545
||| || || |||| ||||| || || ||| |||| |||| | || |||
Sbjct 294617 CTCGTCGCCGTAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGTCCAAG 294559
Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605
||| || || || |||||||||||||| || |||||||| || | | ||| | ||
Sbjct 294558 TCCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGAAACAAAT 294499
Query 111606 CTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665
|||| ||| ||||| | ||| ||||| || | |||| || || | ||||
Sbjct 294498 CTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAAATAT 294439
Query 111666 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGA 111721
| || |||||||| || || || | || | | || |||| | ||| | ||
Sbjct 294438 CAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTG-TTACCACCCTGG 294380
Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781
| ||||| || || ||| ||||| || |||| ||| ||||| | || | || |
Sbjct 294379 TCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAGGTA 294320
Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841
|| ||||| || ||| ||| | | | | | || |||||| || | ||||||
Sbjct 294319 CCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCAATA 294260
Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901
|| ||||| || || || ||||| || | | ||| | || ||||| | |||
Sbjct 294259 CCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATA 294200
Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961
||||||||||| |||||| | ||| ||| |||||| || ||| |||| |||||||||
Sbjct 294199 GAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCA 294140
Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGTCTC 112020
|| || | ||||| | || ||| | || || || | ||||| || ||||| ||
Sbjct 294139 TTAAACAAAGTTGGAGAGGCATGAGT-AAAGTATTTTAGAGACATTAAGTTATATGTTTC 294081
Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
| | | || |||||| ||||||||||| | |||||| | |||
Sbjct 294080 TAGAGCCGCCTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCAT 294033
>seq9
Length=442403
Score = 244 bits (270), Expect = 1e-59
Identities = 916/1408 (65%), Gaps = 50/1408 (4%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGG 110765
||| ||||||| || |||||| || ||||| |||| | |||||| |||| | || |
Sbjct 239285 GTACATGTTTGAAGTCACTGGTTCGAAACATTCGTTAT-ATCCAAGAATTTGAGAAGTTG 239343
Query 110766 AGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGA---T 110820
|||| ||||||||||| ||||| ||||| ||| | | | || | | |||| |
Sbjct 239344 AGGCAGTTGGCATTGGCGCCATTGTCAAAGA--GTTTCTTA-ATCCATGT--TTGACAAT 239398
Query 110821 G-CGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATGTC 110877
| | || ||| || ||||| || | | | | ||| || | |||| |||||||
Sbjct 239399 GTCCTTTCTTAAGGTT-TCCCAATCCCACAT-ACCAAATGGCTTAGCATTCC-ACATGTC 239455
Query 110878 AAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGC 110937
||| || || | || | || || |||||||| || || || ||| ||||| |
Sbjct 239456 AAATTGTAGAATACCCTTAGAGGCTGGAGAACCTTCGAAAGTAGAATACTTACCTTC--C 239513
Query 110938 TTCAG--CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995
||| | ||||||||||| || || || | || ||||| |||||||| || || |
Sbjct 239514 TTCTGTGCCAATTCACAGGAGGCTTCAAGAGTAGCATGATAAATGGTTTCGAAAATCTGT 239573
Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATC 111054
|||| | ||||| ||||| ||||| | | || ||| || ||| | |||
Sbjct 239574 TTGTTCAAAGTTTGAGCTTCTTCTGATTCAAAAGGG-AGACGCAGCATCATATAGGTATC 239632
Query 111055 CGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGT 111114
|| ||||||||||||||||| |||||||||| || | |||||| || |||| ||
Sbjct 239633 GGCCAGACCTTGAACACCCAAGGCAATAGGTCTATGCCTCATATTTGAATTTCTGGCTTC 239692
Query 111115 CTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174
||| |||||| |||| | ||| ||||||| ||| | || | ||||| | || |
Sbjct 239693 AGGAACTGGATAATAATTACGGTCGATGACTCTGTTCAAGTTATGGGTAATGACTTTAGC 239752
Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT------CTCTTCA------TTGAC 111222
|||||||| | | || ||| | || | ||| |||||| | |||
Sbjct 239753 AATTTCATGTAAACTCTCGAAATTATAACTTGCAGTTTTACCATCTTCAGACATCTCGAC 239812
Query 111223 ATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTA 111282
| | ||| ||||| || || || | ||| ||||| || || ||||| | ||
Sbjct 239813 AAATGCTGGGAGGGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATA 239872
Query 111283 CTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACT 111342
||| | ||||| ||| |||||||| ||||| || ||||| |||| |||||| |
Sbjct 239873 CTCGACGATTTCACAACACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGT 239932
Query 111343 CTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTT 111402
||| |||| || || |||||||| | |||| | || || || || || || |||| ||
Sbjct 239933 CTTTCTGTTACATGCGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTG 239992
Query 111403 GAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCT 111461
| ||| || | ||| ||| | | ||| | ||||| || | || || ||| |
Sbjct 239993 TAAAATGGCATACCATAACTTTTG-GGC---TTTAATGGTTTTACCACGACCTTCCCTTT 240048
Query 111462 CGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT 111521
|||| || || || ||||||| || |||||| | || | |||||| ||
Sbjct 240049 CGTAACGGGTATATAGCTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAG 240108
Query 111522 TGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTG 111581
||| | || | || ||| | ||| | || | ||| || ||||| |||||||| |
Sbjct 240109 CACTGGGAGAAAATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAG 240168
Query 111582 GAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
|||||||||| | | || | ||| || ||| ||||| | ||| ||| | ||
Sbjct 240169 GAATCCACAGAGCAGGGAATAAATCCCTTGCACGAATTTCTTCTTTACCATGGGTTTTTC 240228
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAGATAGACTGCGATAGAT 111700
| || | || || | |||||| ||||||||||| | ||||| | | || | |
Sbjct 240229 TAATATCGACAAAGTCGAAGATATCTGCGTGCCATGGTTCCAAGA-AAAGGGCAAAGGCA 240287
Query 111701 CC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 111756
|| || | | | || |||| | ||||| || || || ||| || || ||||
Sbjct 240288 CCAGGTCTCTTGTTG-CCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAAT 240346
Query 111757 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 111816
||| ||||| | |||| ||| ||| || || || ||| ||| ||| |
Sbjct 240347 CATAGGAATCAACCCATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACG 240406
Query 111817 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 111876
| | | || || | |||| ||| || || ||| || || ||||| || |
Sbjct 240407 GATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTT 240466
Query 111877 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 111936
| ||| |||| ||||| | || ||||| ||||| |||| || ||||| || ||
Sbjct 240467 CAAAGTATCATAAATACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGA 240526
Query 111937 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 111996
||| || || ||| |||||||| || || | |||||| | |||||| |||| ||| |
Sbjct 240527 CATTTGGGGGTGTGGAGTACCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAA-ATATC 240585
Query 111997 TT-GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055
|| |||||| | ||| |||| || |||||||| || || |||||||| || |
Sbjct 240586 TTAATGACATCAAATTGTAGGTCTTCAGCACAGAATCGATATCACTACCGTGGATACCTA 240645
Query 112056 TTGCGACCCGCATGAACATGTACTGTGG 112083
|| || ||||| | || || ||||||
Sbjct 240646 GCGCCACACGCATAACCAAGTGCTGTGG 240673
>seq2
Length=800085
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|| ||||| |||| ||| |||| || || || ||||| ||||||||||| |||||
Sbjct 713137 TACGGTCGCATTGCGCCAAGATCAGGCCTAGCAGTGAAAAATGGTATTCAAACCGGTGCT 713196
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|||||| | || || || || |||||||| ||||| || | ||||||||| | |
Sbjct 713197 GGTGTTGTCGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACAG 713256
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
| ||| || | | || ||||| |||||| | || |||
Sbjct 713257 AGAGATTTCGCCATCAAAAAAGGTGATCGCGTAGCCCAA 713295
>seq10
Length=729272
Score = 82.4 bits (90), Expect = 1e-10
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||| || |||| | |||| | ||| || |||||| | |||
Sbjct 390327 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCG 390268
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||| | ||| | |||||||||||| |||| | | ||| || ||||||||||||| |
Sbjct 390267 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 390208
Query 122779 CCCTCCACACACGCAAACGC 122798
|| || | | | ||||| ||
Sbjct 390207 CCTTCGATAGAGGCAAAGGC 390188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031866543200
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