Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 178 2e-39
seq2 118 1e-21
>seq5
Length=553973
Score = 178 bits (196), Expect = 2e-39
Identities = 817/1290 (63%), Gaps = 32/1290 (2%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| ||||||| || ||| ||||| || ||||| | |||||| ||||||| ||||||
Sbjct 295405 TACATATTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 295346
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || ||||| ||||||||| | ||| | | ||| | | | | | || |
Sbjct 295345 GCAGTAGGCATTGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTTCATGACATCTTTC 295286
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361
| | || ||||| || | || | | | | ||||||||| ||||| ||
Sbjct 295285 CTCAAAGTATCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGT 295226
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
|||||||| || ||||| || || | || || || ||||| || || | || | |
Sbjct 295225 ATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGT 295166
Query 118422 TC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
|| | |||| | | |||| | ||||| ||||||||||| || | ||| |
Sbjct 295165 TCACAAGAAGCTTCCATAGAGG----CATGATAAATTGTTTCAAAGATTTGGATATTTAG 295110
Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537
| |||||| || |||||||| | | || ||| || || || || | |||
Sbjct 295109 TAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACC 295050
Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGG 118597
||| ||||| | ||||||| | |||||||||||| || | | || || || ||
Sbjct 295049 TTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGG 294990
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| |||| | ||| ||||| || |||| ||| || ||||| || | ||||| ||
Sbjct 294989 GTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTG 294930
Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCAT-TGACAT--------ACTTAGG 118705
| |||| | | | | | ||| | | || | |||| | || ||
Sbjct 294929 TAATTTTTTGAAGTTGTATGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGG 294870
Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765
| ||| | || |||| ||||| |||| || || ||| | | | |||||| | |||
Sbjct 294869 CAAGGCAACAGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAAT 294810
Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825
||| ||| |||||||| ||| ||| || ||||| ||||| || |||||| ||||
Sbjct 294809 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTT 294750
Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885
|| ||||| || |||| | | || || ||||| || ||||| | | | ||| |
Sbjct 294749 GCAAGCATCTTTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGA 294690
Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945
| ||| | | ||| | | ||| || | || || |||| ||||| ||
Sbjct 294689 ATACCATAATTTTTGAGC---CTTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGT 294633
Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003
|| || ||||||||||| || || || | | || ||| || || || |||
Sbjct 294632 ATATAGAGCTTCAAACTCGTCGCCGTAACAGTCGCTTAGA--CCAGGAGCGGCTGTTGGA 294575
Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063
|||| | || ||| ||| ||| || || ||||||||||| || || || |||||
Sbjct 294574 GAGAACAAAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCAT 294515
Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123
|| || | || | ||| | ||| |||||| | || || || | | ||
Sbjct 294514 AGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCA 294455
Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTT 119179
| ||| || | ||||| || ||||| ||||||||||||| || | | || |||
Sbjct 294454 ATAAAATCAAAAATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTT 294395
Query 119180 ACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239
| |||| |||||| ||||| | || ||| ||||| ||||||| ||| |||||
Sbjct 294394 TTG-TTACCACCCTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAAT 294336
Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTG 119299
| || | || || ||||| || ||| ||| | | | | | || ||
Sbjct 294335 TAACCCGTTAGAGGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATG 294276
Query 119300 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 119359
||| || | ||||||||| || || || || || || || || | | | || |
Sbjct 294275 GATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTC 294216
Query 119360 GTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGG 119419
||| || || ||||| ||||| |||| | |||| | ||| || |||||||||||
Sbjct 294215 GTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGG 294156
Query 119420 CCTGGGTGTACCAGCGTTGAAGAGAGTTGG 119449
| || |||||||| || || | ||||||
Sbjct 294155 TTTTGGAGTACCAGCATTAAACAAAGTTGG 294126
>seq2
Length=800085
Score = 118 bits (130), Expect = 1e-21
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 167948 CTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGC 168007
|||||||||| | ||||||||||| || || || ||||| | |||||| ||| |||||
Sbjct 713136 CTACGGTCGCATTGCGCCAAGATCAGGCCTAGCAGTGAAAAATGGTATTCAAACCGGTGC 713195
Query 168008 GGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCA 168067
|||||||| || ||| || || |||||||| ||||| || | ||||||||| ||
Sbjct 713196 TGGTGTTGTCGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACA 713255
Query 168068 CACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107
| ||||||| |||||||| || |||||| | || |||
Sbjct 713256 GAGAGATTTCGCCATCAAAAAAGGTGATCGCGTAGCCCAA 713295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435068582520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |