Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 235 6e-57
seq9 152 6e-32
>seq5
Length=553973
Score = 235 bits (260), Expect = 6e-57
Identities = 828/1277 (65%), Gaps = 42/1277 (3%)
Strand=Plus/Plus
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||| | || ||||||||||| |||| ||| ||||||||| ||| ||| | |||||
Sbjct 294126 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 294185
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| ||||||||||| ||| | ||||| || | ||| | | || ||||| || ||
Sbjct 294186 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 294245
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
|| ||||| |||||||| | || |||||| || | | | | | ||| |||
Sbjct 294246 AAAACTGCTGGTGGTATTGGTCTACATATCCATAATATTCGTTCAACTGGTTCTTACATT 294305
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| ||||| ||| || | || | ||||| ||| |||| || ||||| |||
Sbjct 294306 GCTGGTACAAACGGTACCTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAACACC 294365
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| || ||||| | || | | || | |||| || | | || | || || ||
Sbjct 294366 GCCCGTTATGTCGACCAGGGT-GGTAACAAAAGACCTGGCGCCTTTGCCCTGTACCTGGA 294424
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
|||||||| || ||||| | || || |||| | | ||||| ||| | || ||
Sbjct 294425 ACCATGGCATGCTGATATTTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGAAGA 294484
Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744
| |||| | ||| | || | ||||| |||||||| ||||| ||||||||| | |
Sbjct 294485 AATTC-GTGCAAGAGATTTGTTTCCTGCTCTATGGATTCCCGATCTTTTCATGAAGCGTG 294543
Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGAT 104803
| || |||| ||| | |||| || | || | |||| ||| || |||||||| |||
Sbjct 294544 TCGAAGAGAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCCGCTCCTGGTCTAAGCGA- 294601
Query 104804 GCCGT--GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA 104861
| || || || ||||||||||| || || || ||||| |||||||||| |
Sbjct 294602 -CTGTTACGGCGACGAGTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG--- 294657
Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921
| ||| | ||| | | ||| | | ||| | | | ||||| || || |
Sbjct 294658 GTAAGACCATTAAGGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACGG 294717
Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981
||||||| | | |||| ||||| || || ||| |||| ||| ||||| || || |
Sbjct 294718 GTACACCTTTTGTCGTTTATAAAGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTAG 294777
Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041
|||| |||||| || || | || ||||| | || | ||| || || |
Sbjct 294778 GTGTCATCAAGTCATCAAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGAAA 294837
Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA---- 105093
| ||||| |||||| | || || | || | || || || || | | ||||
Sbjct 294838 CTGCTGTTTGTAACTTGGCTTCTGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAGGAC 294896
Query 105094 -GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAA 105148
| |||| |||| | | ||||| | |||||| || | ||| ||| ||
Sbjct 294897 GGCCAAACTTCTACATACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTCGT 294956
Query 105149 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 105208
|| ||||||||||||||||| | |||| ||||| ||||| || | | ||| |||
Sbjct 294957 AATTTAAACAGAGTTATTGATCGTAATTACTACCCTGTTGAAGAAGCGAGAAGATCCAAT 295016
Query 105209 ATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT 105268
|||||||| | ||||||| | | |||||||| ||| | || || |||| |||
Sbjct 295017 ATGAGACATAGACCAATTGCTTTGGGTGTTCAAGGTTTGGCTGACACTTTCA-----TGT 295071
Query 105269 CGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGA 105323
|| ||| | |||||||| || || || | | ||| | || ||||| |
Sbjct 295072 TGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTTGAAA 295131
Query 105324 CCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATG 105383
| || ||||| ||| || | || || || || | || | || || ||||| |
Sbjct 295132 CAATTTATCATGCCTCTATGGAAGCTTCTTGTGAACTAGCTCAAAAGGACGGACCATACG 295191
Query 105384 AAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 105443
||||||| | |||||||||||||| ||||| | ||||| || |||||||||| |
Sbjct 295192 AAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ACCAA 295250
Query 105444 AGACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTT 105502
| ||| | || | || ||||| || | | | || ||| | || | ||| ||
Sbjct 295251 AAACCCTACGGCATGTGGGATTGGGATACTTTGAGGAAAGATGTCATGAAGCATGGTATT 295310
Query 105503 CGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 105562
| ||| | | |||||| |||||||| || || ||||| | ||||| |||||| ||
Sbjct 295311 AGAAACTCTTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTTAT 295370
Query 105563 AATGAATGCTTTGAACC 105579
|||||||| ||||||||
Sbjct 295371 AATGAATGTTTTGAACC 295387
>seq9
Length=442403
Score = 152 bits (168), Expect = 6e-32
Identities = 888/1394 (64%), Gaps = 60/1394 (4%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| || || | ||||| ||||| | ||||| || || || || ||||||||
Sbjct 240673 CCACAGCACTTGGTTATGCGTGTGGCGCTAGGTATCCACGGTAGTGATATCGATTCTGTG 240614
Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|| |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | ||
Sbjct 240613 CTGAAGACCTACAATTTGATGTCATTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 240555
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|| |||||||| ||| ||||||||||| || ||||| || |||| ||||| ||
Sbjct 240554 TAACGCTGGTACTCCACACCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 240495
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| || | ||||| |||| ||| | | || ||||| || || ||| || ||
Sbjct 240494 CTCTATTGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAGACTGCAGG 240435
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||| |||| | || || | | | | ||| ||| ||| || || ||
Sbjct 240434 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACCAA 240375
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| ||| |||| | ||||| ||| |||| || || ||| || || || |||||
Sbjct 240374 CGGTACTTCAAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 240315
Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTT-GAGCCATGGCAC 104635
| |||| ||| | | || || | | || | | |||| || |||||||||
Sbjct 240314 GGACCAAG-GAGGCAACAAGAGACCTGGTGCCTTTGCCCT-TTTCTTGGAACCATGGCAC 240257
Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695
|| |||||| | || || | || | | | ||| ||| | || || | ||||
Sbjct 240256 GCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAATTC-GTGC 240198
Query 104696 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
| ||| | ||| | ||||| |||||||| || || || ||||| | ||| | |||
Sbjct 240197 AAGGGATTTATTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGGA 240138
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
||| ||| || | |||| ||| || || ||| | |||| | ||||||
Sbjct 240137 TGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTGA 240078
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874
|| ||||||| || || || ||||| |||||||| | | || |
Sbjct 240077 TGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCATTAA 240021
Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGTACACCATACA 104933
||| | | ||| | || ||| | |||| | ||||| || || |||||||| | ||
Sbjct 240020 AGCCCAAAAGTTATGGTATGCCATTTTACAAG-CACAAACAGAAACAGGTACACCTTTCA 239962
Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993
|| ||||||| ||||| |||||| ||||| || ||| |||| |||||| || ||
Sbjct 239961 TGGTTTACAAGGACGCATGTAACAGAAAGACAAACCAACAGAACTTGGGTACCATTAAAT 239902
Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053
||||| | ||| |||||| | || | | | | |||||| || || || ||||
Sbjct 239901 CATCCAACTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACCGCCGTTTGTA 239842
Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA---------- 105101
| || || || || || ||||| || || || || ||| | | ||||
Sbjct 239841 ATCTAGCCTCTATTGCCCTCCC--AGCATTTG--TCGAGATGTCTGAAGATGGTAAAACT 239786
Query 105102 -CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAAC 105157
|| | | ||| || | | || ||| || | ||| | ||| | ||| | |||
Sbjct 239785 GCAAGTTATAATTTCGAGAGTTTACATGAAATTGCTAAAGTCATTACCCATAACTTGAAC 239726
Query 105158 AGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACAC 105217
||||| || || | |||| ||| || ||| || | || || |||||||| ||
Sbjct 239725 AGAGTCATCGACCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAGGCAT 239666
Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT--GTAT-TCATTCTTTGTCGCCAC 105274
| || |||| | |||||||| ||||| || ||| ||| | || || ||| ||
Sbjct 239665 AGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGCTGCGTCTCC-- 239608
Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334
| ||||| || || ||||| | | || | || || || ||||| |||||
Sbjct 239607 -CTTTTGAATCAGAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATTTATCAT 239549
Query 105335 GCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394
|| ||||||| || | || |||||| || || ||| ||| || || ||
Sbjct 239548 GCTACTCTTGAAGCCTCCTGTGAATTGGCACAGAAGGAAGGTAAGTATTCTACTTTCGAA 239489
Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 105454
||||||||||| || | || | || |||||||| |||||| | | | || ||| ||
Sbjct 239488 GGTTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGGAATGCTAAG-CCA---TT 239433
Query 105455 CACTA----CGACTGGGAAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTA 105506
|| || |||||| | || ||| || | || |||| | | || | | | |
Sbjct 239432 TGGTATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAA 239377
Query 105507 ACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAAT 105565
|| | | ||||| ||||||||||| ||||| || | |||| |||||| | ||||
Sbjct 239376 ACTCTTTGACAATGGCGCCAATGCCAACTGCCTCAACTTCTCAAATTCTTGGAT-ATAAC 239318
Query 105566 GAATGCTTTGAACC 105579
||||| || |||||
Sbjct 239317 GAATGTTTCGAACC 239304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260676057080
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