Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq12 145 2e-29
seq9 140 8e-28
seq11 125 2e-23
>seq12
Length=1026045
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||||| || | || | ||||||||| ||||||||||| || || | | ||| ||
Sbjct 53721 AGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 53780
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| |||||||| ||||| || || ||||| | | |||||||| ||||||| ||||||
Sbjct 53781 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCC 53840
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|| ||||| ||||| |||||||| || || ||||| || ||||||||| || ||
Sbjct 53841 TTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 53900
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || ||||| || ||||| | |||||
Sbjct 53901 ATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|||| ||| ||||| |||||||| || ||||| || || || || | | || || |||
Sbjct 53496 CTTAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCA 53555
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
|||||||| ||||| || || || || | | |||||||| ||||||| ||||||||
Sbjct 53556 TCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTA 53615
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
|| || || || || ||||| || || ||||| || ||| ||||| ||||| ||
Sbjct 53616 TCTTGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATG 53675
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| ||||| | ||||||
Sbjct 53676 GTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | ||| || || ||||||||||| || || | || || || ||
Sbjct 469427 TCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCC 469368
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 469367 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 469308
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 469307 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 469248
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 469247 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||||| || | || | ||||||||| ||||||||||| || || | | ||| ||
Sbjct 54177 AGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 54236
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| |||||||| ||||| || || ||||| | | ||||| || ||||||| |||||
Sbjct 54237 CCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCT 54296
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||| || ||| || ||||| || || || ||||| ||| || || | ||
Sbjct 54297 TTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTT 54356
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| ||||| | |||||
Sbjct 54357 ATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
>seq9
Length=442403
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| ||||| || || | | ||| || ||
Sbjct 64029 TCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 63970
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 63969 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 63910
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 63909 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 63850
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 63849 GGTCTTACCAGTCAAAGTCTTGACAAA 63823
>seq11
Length=679893
Score = 125 bits (138), Expect = 2e-23
Identities = 141/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
|||||| || ||||||||||| || || | | || || || ||||||| ||||| ||
Sbjct 629579 AGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTCTTCCAATTGCTTACC 629638
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | | |||||||||||| || | |||||||| || |||||||| ||
Sbjct 629639 GGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTGGACTT 629698
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || ||||||||||| |||||| || | |||||| ||||| || || | |||
Sbjct 629699 GACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGT 629758
Query 211097 CTTTACAAA 211105
||| || ||
Sbjct 629759 CTTAACGAA 629767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151747522205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |