Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq10 188 6e-43
>seq10
Length=729272
Score = 188 bits (208), Expect = 6e-43
Identities = 560/855 (65%), Gaps = 24/855 (3%)
Strand=Plus/Minus
Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298
||| ||| ||||||| |||||||| || || |||| |||||| ||||| || || ||
Sbjct 390639 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 390580
Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357
|| | || || || ||||||||||| || || || || | ||||| | ||| ||
Sbjct 390579 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 390520
Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417
|| || || || | | || |||||| || || || | || ||| |||| || ||
Sbjct 390519 TTACCGAAG-GCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 390461
Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474
||| || || | || || || | || | ||| || | | ||||| ||
Sbjct 390460 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATC---CAAGAAGTATCTTTGTTCAAT 390404
Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534
|| || || |||| || | || | | || |||||| || || |
Sbjct 390403 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 390344
Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594
| ||||| || || ||||| || ||||||||||||||||||| ||||| ||||||
Sbjct 390343 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 390284
Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654
||| || || || |||||||| | ||||||||| || | ||| || || | ||| || ||
Sbjct 390283 AGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 390224
Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714
|| || ||||| | ||||| | | |||||| || |||| || || ||| ||
Sbjct 390223 ACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 390164
Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771
| | ||||| ||||||| ||| ||||| | || |||| | || || ||
Sbjct 390163 GTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGC---CTTCTCACCGATTTCTGGGAT 390107
Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828
|||| || || || || |||| ||||| | | ||||| | ||| || || ||
Sbjct 390106 GGTGTGAATGGCATTGAACAAAAATTCACTTTCCTTA---GGGTCCTTAATGTAGGTATC 390050
Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888
|| | | | || |||||||||| |||||||| || || || || || || ||
Sbjct 390049 GATCAACAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAA 389990
Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948
| | || |||| |||||||||||| | | || |||| || |||||||| || ||
Sbjct 389989 ACTCTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 389930
Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008
||||||||| || || ||||| || | ||| ||| ||||| | ||||
Sbjct 389929 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC 389870
Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065
|| | | || ||||| | | | ||| |||| ||||||| ||||||| | |||||
Sbjct 389869 GTTCATTCTGTTGTTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 389810
Query 5066 AAACGACGCTTCCGC 5080
|| || ||||| ||
Sbjct 389809 GAAAGATGCTTCGGC 389795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049511520661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |