Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10 188 6e-43 >seq10 Length=729272 Score = 188 bits (208), Expect = 6e-43 Identities = 560/855 (65%), Gaps = 24/855 (3%) Strand=Plus/Minus Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298 ||| ||| ||||||| |||||||| || || |||| |||||| ||||| || || || Sbjct 390639 TTGGACATAACACCAGCCTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTA 390580 Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357 || | || || || ||||||||||| || || || || | ||||| | ||| || Sbjct 390579 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 390520 Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417 || || || || | | || |||||| || || || | || ||| |||| || || Sbjct 390519 TTACCGAAG-GCGACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 390461 Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474 ||| || || | || || || | || | ||| || | | ||||| || Sbjct 390460 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCATC---CAAGAAGTATCTTTGTTCAAT 390404 Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534 || || || |||| || | || | | || |||||| || || | Sbjct 390403 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 390344 Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594 | ||||| || || ||||| || ||||||||||||||||||| ||||| |||||| Sbjct 390343 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 390284 Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654 ||| || || || |||||||| | ||||||||| || | ||| || || | ||| || || Sbjct 390283 AGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 390224 Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714 || || ||||| | ||||| | | |||||| || |||| || || ||| || Sbjct 390223 ACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 390164 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771 | | ||||| ||||||| ||| ||||| | || |||| | || || || Sbjct 390163 GTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGC---CTTCTCACCGATTTCTGGGAT 390107 Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828 |||| || || || || |||| ||||| | | ||||| | ||| || || || Sbjct 390106 GGTGTGAATGGCATTGAACAAAAATTCACTTTCCTTA---GGGTCCTTAATGTAGGTATC 390050 Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888 || | | | || |||||||||| |||||||| || || || || || || || Sbjct 390049 GATCAACAAGGAGTAGGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAA 389990 Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948 | | || |||| |||||||||||| | | || |||| || |||||||| || || Sbjct 389989 ACTCTTTGCCTCTGGAACTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 389930 Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008 ||||||||| || || ||||| || | ||| ||| ||||| | |||| Sbjct 389929 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC 389870 Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065 || | | || ||||| | | | ||| |||| ||||||| ||||||| | ||||| Sbjct 389869 GTTCATTCTGTTGTTCCAATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 389810 Query 5066 AAACGACGCTTCCGC 5080 || || ||||| || Sbjct 389809 GAAAGATGCTTCGGC 389795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049511520661