Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 2e-23
seq11 105 2e-17
>seq12
Length=1026045
Score = 125 bits (138), Expect = 2e-23
Identities = 163/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || |||||||| || ||||| || ||||| |||| ||| ||||| |||||||| |
Sbjct 53960 CAAG-TGGAGAGTAGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTCAA 54018
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| || || | |||||| ||||| | | || |||||||| |||||||
Sbjct 54019 GTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAA 54078
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||||| | || | |||| ||| || || || |||||||| || || |
Sbjct 54079 TTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTAC 54138
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
| || || ||||| || |||| |||||| ||| |||| |||
Sbjct 54139 CAGTCAGCGTCTTAACAAAGATCTGCATACCACCTCTTAGTCT 54181
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 1/225 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| || || ||||| || || ||||| || ||||| |||| ||| ||||| ||||||||
Sbjct 53501 GACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTC 53560
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| || ||||| || || | |||||| ||||| | | || |||||||| |||||
Sbjct 53561 CAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTG 53620
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|||||| ||||| | || | |||| ||| || || || |||||||| || ||
Sbjct 53621 AATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTT 53680
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118
|| || || ||||| || |||| |||||| ||| |||| |||
Sbjct 53681 ACCAGTCAGCGTCTTAACAAAGATCTGCATACCACCTCTTAGTCT 53725
Score = 107 bits (118), Expect = 4e-18
Identities = 151/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| || |||||||||||||| || | | |||||| |||||||| |
Sbjct 469418 CAAG-TGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCA 469360
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | ||| |||||||| ||||| |
Sbjct 469359 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGA 469300
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| || |||||||| || |
Sbjct 469299 TCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTAC 469240
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | |||||| ||||| | ||||| ||
Sbjct 469239 CGGTTAAAGTCTTGACGAAAATTTGCATCTT 469209
Score = 96.9 bits (106), Expect = 8e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| | || | ||| | ||| ||||| |||||||||||||| |||| || |||
Sbjct 53718 CTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTT 53777
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || || || || ||||| | ||||| ||||| | | || |||
Sbjct 53778 CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCT 53837
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||| || || || | || | |||| ||| || || || ||
Sbjct 53838 TCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGG 53897
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| || || ||||| || || || | |||||
Sbjct 53898 GTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938
Score = 93.3 bits (102), Expect = 1e-13
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| ||||| | || | ||| | ||| ||||| |||||||||||||| |||| || |||
Sbjct 54174 CTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTT 54233
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || ||||| || || || || ||||| | ||||| || || | | || |||
Sbjct 54234 CTACCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCT 54293
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || ||||||||| ||||| | || | | || ||| || ||||| |
Sbjct 54294 TCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAAT 54353
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || | |||||| || || | |||||
Sbjct 54354 GTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 54394
>seq11
Length=679893
Score = 105 bits (116), Expect = 2e-17
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | ||| || || |||||||||||||| || | ||||||||| || ||||| |
Sbjct 629573 ATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTCTTCCAATTG 629632
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| ||||| ||||| | || || ||||| | | ||| |||||||| ||||| || ||
Sbjct 629633 CTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTT 629692
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | | |||| ||| || ||||| | ||| || || || || ||
Sbjct 629693 GGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 629752
Query 152081 GAGAGTCTTCACGAAG 152096
| |||||| ||||||
Sbjct 629753 CAAAGTCTTAACGAAG 629768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820548683407
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |