Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq12 116 3e-21 seq9 84.2 2e-11 >seq12 Length=1026045 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||||||||| || |||||||| |||||||| || ||||| ||| | Sbjct 54394 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 54335 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || || ||||||| ||||||||||| |||| |||||| Sbjct 54334 GATACTATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCAA 54275 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || | || | ||| || || ||| ||||||| || ||| || |||| || || Sbjct 54274 CAGAGATTGATCTTTGCTGGTAAGCAACTGGAAGACGGTAGAACCTTGTCCGACTACAAC 54215 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTT 111311 || ||||| || || || ||||||||||||| Sbjct 54214 ATCCAAAAGGAGTCCACTTTACATTTAGTGTT 54183 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 || ||||||||||| ||||| || || ||||| || || |||||| | ||| ||| | Sbjct 469209 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 469268 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 || || ||| | | || || || || ||||| ||||| | || || Sbjct 469269 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 469328 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||||| | || | ||| || || |||||||||||| | |||| || | || || Sbjct 469329 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTCTGTCTGACTAC 469388 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| |||||||| | || || || ||| | || | ||||| Sbjct 469389 AACATCCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 469438 >seq9 Length=442403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 111108 TTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGT 111167 ||||||||| || ||||| || || ||||| || ||||| ||| | || || | Sbjct 63822 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 63881 Query 111168 TGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCT 111227 || | | || || ||| ||| ||||| ||||| | || || |||||||| | Sbjct 63882 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 63941 Query 111228 TATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAA 111287 || | ||| || || ||||||||||| || ||| || | || || || || ||||| Sbjct 63942 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 64001 Query 111288 AGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||||| || |||| ||||| ||| | || | ||||| Sbjct 64002 AGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGG 64040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421811112605992