Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03-
21] 17 sequences; 11,881,637 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11 176 9e-39
seq12 172 1e-37
seq9 165 2e-35
>seq11
Length=679893
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| | || | ||| || ||
Sbjct 629568 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTGCCGTCTTCC 629627
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||||||||| | |||||||||| || ||||| ||||| ||||||
Sbjct 629628 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGG 629687
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 629688 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTA 629747
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 629748 CCAGTCAAAGTCTTAACGAA 629767
>seq12
Length=1026045
Score = 172 bits (190), Expect = 1e-37
Identities = 155/195 (79%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| || || | |||||| || | ||| || || |||||
Sbjct 469403 TTCCTTTTGGATGTTGTAGTCAGACAGAGTTCTGCCATCTTCCAATTGCTTACCAGCAAA 469344
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| || ||||| ||||||||||||||||| | || || |
Sbjct 469343 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 469284
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 469283 GTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 469224
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 469223 GAAAATTTGCATCTT 469209
Score = 141 bits (156), Expect = 2e-28
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| || ||||||||||||||||| | |||| || | || || || ||||
Sbjct 54191 ATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAGTT 54249
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | ||||| || |||||||| || ||||| || || |
Sbjct 54250 GCTTACCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTT 54309
Query 283015 TTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCG 283074
||| || ||| |||| ||||| || |||| ||||||||| | || || || ||||| |
Sbjct 54310 TTGACTTGACGTTATCAATAGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGG 54369
Query 283075 TCAAAGTCTTAACGAATATCTGCAT 283099
|||||||||| || || || |||||
Sbjct 54370 TCAAAGTCTTGACAAAAATTTGCAT 54394
Score = 127 bits (140), Expect = 4e-24
Identities = 155/206 (75%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTT 282954
|||||| ||| || ||||||||||||||||| | |||| || | || || || ||||
Sbjct 53735 ATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCTACCGTCTTCCAGTT 53793
Query 282955 GTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCT 283014
| || || ||||||||||| | |||||||| |||||||| ||||| || || |||
Sbjct 53794 GCTTACCAGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCCTGAATC- 53852
Query 283015 TTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073
||||| || ||| | || |||||||| |||| ||| || || || || || || |||||
Sbjct 53853 TTGCTCTTCACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTACCA 53912
Query 283074 GTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||| || || || || |||||
Sbjct 53913 GTTAGAGTTTTGACAAAAATTTGCAT 53938
>seq9
Length=442403
Score = 165 bits (182), Expect = 2e-35
Identities = 155/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
||||| ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 64016 TGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 63958
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 63957 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 63898
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 63897 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 63838
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 63837 CAAAGTCTTGACAAA 63823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |