Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10 156 4e-33 >seq10 Length=729272 Score = 156 bits (172), Expect = 4e-33 Identities = 484/743 (65%), Gaps = 17/743 (2%) Strand=Plus/Minus Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 ||||| || || || || || |||| ||||| ||| | ||| ||| ||||||| Sbjct 390504 AAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTCAGCGTTCATACCTAGC 390445 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTT---A 23451 | ||||| | ||||| | ||| || || |||||| ||||| || | | Sbjct 390444 AAGGCAACTGGCAAGGCATCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 390385 Query 23452 ATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACAT 23511 ||| ||| |||||| || || ||| | || |||| ||||| || ||| Sbjct 390384 ATTTTTTCAACAATGGCTGGGTCT---GGTTTGTTCTTCAAATGGGCGAACAACAAGCAT 390328 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| || || | ||||| || || | ||||||||| ||||| || || || || Sbjct 390327 GCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAACCG 390268 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||| | |||| || || | ||| || || | || || || ||||| ||||| | | Sbjct 390267 GGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGACA 390208 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || | || |||||||| || || | | |||||| || | | || |||| Sbjct 390207 CCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATC 390148 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGTTTCAATTGCTTT 23747 ||| || | ||| | |||||| | || | | || || | ||| || || Sbjct 390147 CATCTTAGAGCCCACTCGGCCTTC----TCACCGATTTCTGGGATGGTGTGAATGGCATT 390092 Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 || | ||| |||| | | || | || || ||||| || | || || | Sbjct 390091 GAACAAAAATTCACTTTCCTTAGGGTCCTTAATGTAGGTATCGATCAACAAGGAGTAGGT 390032 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 ||||||||||||||||||||| || || || ||||| |||| | || || | | Sbjct 390031 TTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGGAAC 389972 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 |||||| || | | || ||| | | || ||||| ||||||||||| ||| ||| || Sbjct 389971 TTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGC 389912 Query 23928 AAAGAAAGCAAGAAC-ATA-TTTTATAAAATGTCTTTCATCAGTTGATAAT-TTTTTCCA 23984 || || |||||||| || || ||||| ||| | ||| || | || ||||| Sbjct 389911 GAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTTCATTCTGTTGTTCCA 389852 Query 23985 ATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACG 24044 ||||| |||||| || || ||||||| ||| ||| | ||||| ||| ||| |||||| Sbjct 389851 ATCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGATGCTTCGGCACG 389792 Query 24045 CTTATACATTAGCCAAATATCAT 24067 |||||| | |||| || |||| Sbjct 389791 CTTATAAGCTTGCCAGATTTCAT 389769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487889183800