Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq12 127 1e-24 seq11 91.5 1e-13 >seq12 Length=1026045 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| ||||| ||||| | || | ||| |||||||||||||||||| || Sbjct 53708 CATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTC 53767 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || | || | | |||| ||||| ||||| || ||||||||||| | ||| || |||| Sbjct 53768 GGACAAGGTTCTAC-CGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGGTCTG 53826 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 ||| | ||||||||| ||| ||||| ||||| | | || ||||||| |||| Sbjct 53827 GAGGAATACCTTCCTTATCCTGAATCTTGCTCTTCACGTTGTCAATAGTGTCGGAAGATT 53886 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | || || || || || || || || || || || |||||||| Sbjct 53887 CAACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 53938 Score = 114 bits (126), Expect = 9e-21 Identities = 169/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| ||||| ||||| | || | ||| |||||||||||||||||| || Sbjct 54164 CATACCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTC 54223 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || | || | | |||| ||||| ||||| || ||||||||||| | ||| ||||||| Sbjct 54224 GGACAAGGTTCTAC-CGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTCTGTTGATCTG 54282 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285 ||| | |||||| || ||| || || ||| | | | || || || | |||| Sbjct 54283 GAGGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATAGTATCAGAAGATT 54342 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 | || |||| || || || || || || | ||||| || || |||||||| |||| Sbjct 54343 CGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATAATGT 54399 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||||| |||||| |||| ||| | || ||||||||||||||||| || | Sbjct 469438 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 469379 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| || | || |||| ||||| || ||||||||||| | || || || | | Sbjct 469378 AGAGTTCT-GC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 469321 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 469320 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 469263 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 469262 AACTTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 469212 >seq11 Length=679893 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||| | |||||| |||| || | ||| ||||||||||||||||| || Sbjct 629547 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 629606 Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | ||| || |||| |||| ||||| |||||||||||||| | || || || | Sbjct 629607 GATAAAGTTCT-GC-CGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAG 629664 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||||||||| || ||||| ||| || ||| | |||||||| | || Sbjct 629665 GTGGGATACCTTCCTTATCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 629722 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||| || || | || || ||||| || || | ||||| |||||| Sbjct 629723 TTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 629768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990325414489