Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 1e-14 >seq12 Length=1026045 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| ||||| || || ||| ||||| ||||| || |||||||| | || | | || Sbjct 53498 TAAGACCAGGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATC 53557 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || ||||| ||||| || |||| | ||||||||| | |||| | ||||| || Sbjct 53558 TTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATC 53617 Query 41770 CATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| |||| | | ||| | || |||||| || || ||||||| || || | Sbjct 53618 T-TGAATTTTCGACTTGACGTTGTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGG 53676 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| ||||||||||| || || |||||||| Sbjct 53677 TCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 53710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||| ||||| || |||||||| | || | | || || || ||||| ||||| || Sbjct 53976 TCCTTTTGAATATTGTAGTCGGATAACGTTCTGCCATCTTCAAGTTGCTTACCGGCAAAA 54035 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| | ||||||||| | |||| | ||||| || ||| |||| | | ||| Sbjct 54036 ATCAACCTCTGTTGGTCTGGAGGAATACCTTCCTTATCT-TGAATTTTCGACTTGACGTT 54094 Query 41792 GACACA-GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | || |||||| || || ||||||| || || || ||||| ||||||||||| || Sbjct 54095 GTCAATCGTGTCGGAAGATTCGACCTCCAGAGTAATGGTCTTACCAGTCAGCGTCTTAAC 54154 Query 41851 GAAAATCTGCAT 41862 || |||||||| Sbjct 54155 AAAGATCTGCAT 54166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303901760400