Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq14 118 2e-21
seq10 89.7 1e-12
>seq14
Length=769158
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 319818 ATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCC 319877
|||||||||||| ||| | || | |||| || |||||| || || | ||||||
Sbjct 592333 ATCGTGTTCCACATAAACGGTGCGACACTCATCTTGAGTGGGGAAGCCATCGACCTGGCC 592274
Query 319878 GTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTA 319937
|| |||||| ||||| || || ||||| || || || ||||| ||||| ||||| ||
Sbjct 592273 ATTAGCAATAGATCGCATTAGAGTAGATTTTCCGGCACCATTTGGGCCACATAGACCATA 592214
Query 319938 GCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGC 319997
| | || || || | | || | || ||||| || |||||||| ||||||||||
Sbjct 592213 TCTTCTACCTCGCTTTAACCTCAATTGAGTCTTGTTTAGCAGAATTTTGGCACCATATGC 592154
Query 319998 CAGAGAAAATTCACAATCACACAGATCCTCACC 320030
|| ||||||||||| | ||||| ||| |||||
Sbjct 592153 CAAGGAAAATTCACAGTTACACAAATCTTCACC 592121
>seq10
Length=707288
Score = 89.7 bits (98), Expect = 1e-12
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 230428 GACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486
||||| | ||| || ||||| | || ||||||||||| || ||| || ||| | ||
Sbjct 371460 GACGCCTTACCA-GTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAATACGTTGA 371518
Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAA-CTCTAAGA 230545
||||| || ||| | |||| ||||| | ||| || ||||| ||||| || || |
Sbjct 371519 GTTCGTTGCTGACAGACTTTTGGTTGCCTTCGGTAACAAGAAATACTACAAGGTCGAA-A 371577
Query 230546 ACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGC 230605
||||||| | |||||||| ||| || | || |||||||||||||| ||||||
Sbjct 371578 ACCCCTTCGACTTTATGGAAAACATCTCTTTGGCTGGTAAGACCAACTTCTTTGAAAAGA 371637
Query 230606 GTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
| || ||| || || | | ||||||| |||
Sbjct 371638 GAGTTTCTGATTACCAAAAGGCTGGTGTTATG 371669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823769592710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |