Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10 123 3e-23 >seq10 Length=707288 Score = 123 bits (136), Expect = 3e-23 Identities = 287/432 (66%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 ||||| || ||| || || || |||||||||| || | ||||||||| || ||||| Sbjct 371365 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAGAAGGTCAAA 371306 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| | |||| ||||| ||||| || || | |||||| || || || ||||| Sbjct 371305 CCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 371246 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 | ||| |||| || ||||| |||| || || ||| | || ||||| || || Sbjct 371245 ACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 371186 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGTTTCTATGGC 17199 |||||| | | |||||||||| || | | ||| || || || | ||||| Sbjct 371185 ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATA----GTGTGAATGGC 371130 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || || || || |||||| |||| | || || |||||||| | || | ||| Sbjct 371129 ATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAATAAGGAGTA 371070 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 |||| || || || || || || || || || || || || | || || | Sbjct 371069 AGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTTTGCCTCTGG 371010 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 ||||||||||| | |||| ||| | | ||||| || || || ||||| || Sbjct 371009 AATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 370950 Query 17380 GGCGAAAAACGC 17391 ||||||||| || Sbjct 370949 GGCGAAAAAGGC 370938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545490021560