Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq10 109 6e-19 >seq10 Length=707288 Score = 109 bits (120), Expect = 6e-19 Identities = 289/441 (66%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| || || || |||||| || | ||||||||||||| || | |||||| || Sbjct 371374 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 371315 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || || |||||||| | |||| ||||| |||||||| || | || || || || Sbjct 371314 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 371255 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 || ||||| | ||| || | ||| ||||| |||| || || ||| | || || || Sbjct 371254 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 371195 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGT 16428 | |||||||| | | |||| ||||| || | | ||| | || || Sbjct 371194 GCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCT----GGGATAGT 371139 Query 16429 TTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAG 16488 | ||||| || ||||| || |||||| | || | || || ||||| |||| Sbjct 371138 GTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGATCAA 371079 Query 16489 TAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCG 16548 ||| ||| |||| || || || || || || || || || |||||||| | Sbjct 371078 TAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACTCTT 371019 Query 16549 AGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACC 16608 ||||| | ||||| ||||| | | || ||| ||| ||| ||||| || ||||| Sbjct 371018 TGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 370959 Query 16609 GTCACTTGCAGCAAAAAACGC 16629 |||| || || ||||| || Sbjct 370958 GTCAGAAGCGGCGAAAAAGGC 370938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414291324440