Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 8e-17
seq10 87.8 2e-12
>seq12
Length=1029308
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || |||||||| || ||| | || || ||| | ||
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| |||||||| |||||||| || || || | |||||
Sbjct 66251 GACACTATTGACAACG-TCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCA 66193
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | || | || || || || ||||| || | | ||| | |||||||||
Sbjct 66192 ACAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTCCGACTACAA 66133
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901
|||||| || ||| |||| | ||| |||||||
Sbjct 66132 CATCCAAAAAGAGTCCACTTTACATTTAGTGTT 66100
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || || || || || ||| |||| |||||| | ||
Sbjct 66083 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCC 66024
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| |||||||| || || || || || || | |||||
Sbjct 66023 GACACTATTGACAACG-TCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCA 65965
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | || | || || ||||| ||||| || | | ||| | |||||||||
Sbjct 65964 ACAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAACCTTGTCCGACTACAA 65905
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| || ||||| | || || || || || || | |||||||| ||
Sbjct 65904 CATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGG 65857
>seq10
Length=707288
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 116981 GAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGC 117040
||||||||||||||||| || | ||||| | | || ||| || || || |
Sbjct 371157 GAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGA 371216
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
|| || ||||| || | |||| || |||||||| || || |||||| |||| ||
Sbjct 371217 CTAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTC 371276
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
||| | ||||| | || | ||||| || |||| ||| ||||| | || | |||
Sbjct 371277 TGGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGA 371336
Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208
||||| ||| |||| ||||||||| || || ||||| ||||||
Sbjct 371337 GACGAAGGTTTGCACACCGACTTTGCATGCTTATTGTTCGCCCATTTG 371384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219090515920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |