Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 3e-25
seq11 122 1e-22
seq9 111 2e-19
seq15 93.3 6e-14
>seq12
Length=1029308
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | || || ||||| |||||||||||||| ||||| ||||| |
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||| || ||||||||||| || || || |||
Sbjct 66251 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66192
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | |||||||| || || ||| | || ||| | |||| || || || ||
Sbjct 66191 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 66132
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| |||||||| || ||||| ||||| || ||| | || ||||||||||
Sbjct 66131 ATCCAAAAAGAGTCCACTTTACATTTAGTGTTAAGACTAAGAGGTGGTAT 66082
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| | || || ||||| ||||| | || | ||| | |
Sbjct 66767 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 66708
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | || |||||||| || ||||||||||| || || || |||
Sbjct 66707 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66648
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | |||||||| || || ||| | || ||| || ||||| | ||||||||
Sbjct 66647 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATAAC 66588
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || |||||||| || | | || ||||||||||
Sbjct 66587 ATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGGTAT 66538
Score = 118 bits (130), Expect = 2e-21
Identities = 169/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || || || || ||||| ||| | ||| | ||| |
Sbjct 66539 ATGCAGATCTTTGTCAAGACGCTGACTGGTAAGACTATTACTCTGGAGGTCGAATCTTCC 66480
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || || | || |||||||||||||| |||||||| || || || |||
Sbjct 66479 GACACGATCGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCTCCAGACCAA 66420
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | |||||||| || |||||| | || ||| | |||| ||| ||||| |||
Sbjct 66419 CAGAGATTGATTTTTGCCGGTAAACAACTGGAAGATGGCAGAACGTTATCCGATTACAAT 66360
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| || || ||| | || ||||| || | || |||||||||| ||| ||
Sbjct 66359 ATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTATGCAAATTT 66302
Score = 102 bits (112), Expect = 1e-16
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| || || || || || ||||| | ||| | ||| |
Sbjct 66083 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCC 66024
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||||| |||||||| ||||| || |||
Sbjct 66023 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 65964
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | |||||||| || |||||| | || ||| | |||| || || || ||
Sbjct 65963 CAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 65904
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTA 124767
|||||||| ||||| ||| | || |||| ||| | || | |||||||
Sbjct 65903 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTA 65855
>seq11
Length=687600
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
||||| | || || || || || ||| |||| ||||| | ||| || ||| |||
Sbjct 621863 AAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGACACCATTGACAAT 621804
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || || || ||||| || |||||||| |||||||| |||||||| | || |||
Sbjct 621803 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 621744
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||||| || || || |||| ||| || || || || ||||| |||||
Sbjct 621743 GCCGGTAAGCAATTGGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCC 621684
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||||||||| | ||| ||||||||||
Sbjct 621683 ACTTTACATTTGGTTTTGAGATTAAGAGGTGGTAT 621649
>seq9
Length=431692
Score = 111 bits (122), Expect = 2e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 62720 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 62779
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 62780 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 62839
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 62840 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 62899
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||| || || || || | || ||||||||||
Sbjct 62900 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGTAT 62940
>seq15
Length=1049886
Score = 93.3 bits (102), Expect = 6e-14
Identities = 195/288 (68%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 205561 ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGA 205620
|||| ||||||| ||| || || ||||| | | |||| || |||| ||| |||
Sbjct 445064 ACATAAAATTGTGAGAAAATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGA 445123
Query 205621 TTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATA 205680
||||| || | | || || ||||| | ||| || | |||| ||||| || |
Sbjct 445124 TTCCAAGCACTCATAATAATTCTTCTATCATAAGGATTTGTCTTTAGTTTATGAATGACC 445183
Query 205681 TGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC-CATATCAATATATTTAGC 205739
|| | |||||||||| || || | ||| | ||| || || | ||||||||
Sbjct 445184 TGCTTCAATTGATCAATACCCTGTCCAGCATAGTCGTCATCACAGGTCT-TGTATTTAGC 445242
Query 205740 ACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATT 205799
||| ||||| | |||||| || |||||||| || |||||||| || |||||||||| |
Sbjct 445243 ACCGAAATGCCTCCATTGGAATCCATAAACGGGCCCTAAATCCCCCACTTTTCTATCTGT 445302
Query 205800 AAAACCACGtttttttATATATTTTAATGATCCATTTTCATCCCAAAT 205847
|| || || | || ||||| |||||||| | ||||||||
Sbjct 445303 GAACCCCATCTTATCTAGATATTCACGGGATCCATTACCGTCCCAAAT 445350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455839465600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |