Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 5e-18
seq12 98.7 8e-16
>seq9
Length=431692
Score = 105 bits (116), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 18121 TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATT 18180
||| ||||| ||||||||||||||||||||||| | || ||| ||| ||||||||||
Sbjct 62913 TGTAAAGTG--GATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATT 62856
Query 18181 GTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTT 18240
| || || ||| |||| | ||||||||| || || | |||||||| || ||| |
Sbjct 62855 GCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCT 62796
Query 18241 GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300
| |||||| | ||| ||||||| | || ||| | |||||| | || || |
Sbjct 62795 TTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAG 62736
Query 18301 TCAATGTTTTTACAAAA 18317
|||| || || ||||||
Sbjct 62735 TCAAAGTCTTGACAAAA 62719
>seq12
Length=1029308
Score = 98.7 bits (108), Expect = 8e-16
Identities = 115/154 (75%), Gaps = 1/154 (1%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| ||| || || ||||| ||||||||||||||||||| || ||| | | ||
Sbjct 65871 TAAG-ACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCAT 65929
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
|||||| |||||| || ||| | || | ||| ||||| || || | ||||||||||
Sbjct 65930 CTTCCAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTAT 65989
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTC 18265
| ||||| | |||||| | ||| ||||||
Sbjct 65990 CTTGAATTTTTGACTTGACGTTGTCAATAGTGTC 66023
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| || |||||||| ||||||||||||| || ||| | | |||||||| |
Sbjct 66108 ATGTAAAGTG--GACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGT 66165
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
|| || || ||| | || | ||| ||||| || || | ||||| || || ||||
Sbjct 66166 TGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATT 66225
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| | |||||| | ||| |||||| | || || | ||| || |||||||
Sbjct 66226 TTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTGCCA 66285
Query 18300 GTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||| ||||||||||||||
Sbjct 66286 GTTAGAGTTTTGACAAAAATTTGCAT 66311
Score = 95.1 bits (104), Expect = 9e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| |||||||| |||||||| || || | || |||| ||| |||||||| ||| || ||
Sbjct 66571 GTAGATTCTTTCTGAATGTTATAATCAGACAGTGTTCTACCATCTTCCAGTTGCTTACCG 66630
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| | || | || ||||| || || | ||||| || || ||||| | ||||
Sbjct 66631 GCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTTG 66690
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| || ||| | ||| ||| | || ||| |||| |||||||| ||
Sbjct 66691 ACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 66750
Query 18309 TTTACAAAAATTTGCAT 18325
|| ||||||||||||||
Sbjct 66751 TTGACAAAAATTTGCAT 66767
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||| | || ||| | | |||||||
Sbjct 475677 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCC 475618
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 475617 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 475558
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 475557 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTA 475498
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 475497 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 475466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343921404665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |