Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq12 111 1e-19
>seq12
Length=1029308
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
||||| || ||||| ||||| |||| |||||||| |||||| | || || ||||| |
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | | || | || ||| ||||||| | |||||||| | || |||||
Sbjct 66251 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66192
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| | || || | ||| || || |||||||||||| || || || ||| |||| |
Sbjct 66191 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 66132
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGA 25047
|| || |||||| |||| | |||||||||||| ||
Sbjct 66131 ATCCAAAAAGAGTCCACTTTACATTTAGTGTTAAGA 66096
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || ||||| || | || || || || |||||| |||| |||||||| |
Sbjct 66083 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCC 66024
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | | || | || ||| ||||||| | || ||||| | || |||||
Sbjct 66023 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 65964
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| | || || | ||| || ||||||||||||||| || || || ||| |||| |
Sbjct 65963 CAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 65904
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| || || || | || || || | || ||| | ||| | || |||
Sbjct 65903 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGT 65856
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 24827 ACATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAAT 24886
|||| ||||| || ||||| || || || ||||| ||||| ||||| | || |||||||
Sbjct 66772 ACATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAAT 66713
Query 24887 CGAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTG 24946
| || | | || | || ||| ||||||| | |||||||| | || |
Sbjct 66712 CTTCTGATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAG 66653
Query 24947 ACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATT 25006
|||| || | || || | ||| || || |||||||||||| | || || ||||
Sbjct 66652 ACCAACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATT 66593
Query 25007 ACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
| | ||| |||||||| | || | ||||||||| | ||||| | || |||
Sbjct 66592 ATAACATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGGT 66540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418303913332640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |