Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 226 3e-54
seq10 181 9e-41
seq9 170 2e-37
seq12 111 1e-19
>seq5
Length=571131
Score = 226 bits (250), Expect = 3e-54
Identities = 459/677 (68%), Gaps = 6/677 (1%)
Strand=Plus/Minus
Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGG--CGATTGCATCGGACACATGA 23321
|| ||||| ||| |||||||||||||| || ||||| || || | ||| | | |
Sbjct 298442 GCTTCAAACTCGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTG--TTGGAGAGAACA 298385
Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381
| |||| | | | ||| || || |||| |||||||| || ||||| |||||
Sbjct 298384 AAGTCCAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAG 298325
Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441
|||| || | || || | || ||||| ||| ||||||| | | ||| | ||| |
Sbjct 298324 GAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAAT 298265
Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501
| || | || |||||||| || || ||||| | ||||| || || ||||| || || |
Sbjct 298264 CAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTAC 298205
Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561
| ||||| ||||| |||||||| || || || | || | | ||| || | | ||||
Sbjct 298204 CACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGT 298145
Query 23562 TGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGA 23621
| || | ||| | || || | ||||| ||| |||| ||| || | || |
Sbjct 298144 TAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTA 298085
Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGC 23681
||| || || || | | ||| || |||| || |||| ||||| ||||||||| || |
Sbjct 298084 GACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATAC 298025
Query 23682 CCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCG 23741
||||||| |||||| || | |||||||||||||| || |||||||| | ||| || |
Sbjct 298024 CCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAG 297965
Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801
|| | || |||| || || ||| || ||||||||| ||||||| || |
Sbjct 297964 TACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTAT 297905
Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCT-CCGTGTATACCGATGGCGACGCGCATCATC 23860
| || || | || || || |||| |||| ||||| || || | ||||| | ||| ||
Sbjct 297904 ATGTTTCTAGAGCAGCTTCGATGT-CTCTACCGTGGATGCCCAGTGCGACTCTCATAATT 297846
Query 23861 ATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920
| || ||| || | ||| || |||||| ||| | | | ||| ||||||| ||
Sbjct 297845 AAGTGTTGTGGACGTTCGGCCACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAA 297786
Query 23921 GTTTTAAATCCAAAATA 23937
||||| || ||||||||
Sbjct 297785 GTTTTGAAACCAAAATA 297769
>seq10
Length=707288
Score = 181 bits (200), Expect = 9e-41
Identities = 475/716 (66%), Gaps = 13/716 (2%)
Strand=Plus/Plus
Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650
|| ||||| || || ||||||| |||||| | || ||||||||||| | || |||
Sbjct 370830 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGG 370889
Query 57651 GATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707
| | | || ||| |||||| ||||||| || | || |||||||||
Sbjct 370890 AACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCC 370949
Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767
|| || || ||||||||||| || || ||||| |||| || || ||||| ||| |
Sbjct 370950 GCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAATT 371009
Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATG 57827
| ||||| | | || || || || ||| | |||||||| | ||||| ||||
Sbjct 371010 CCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAACT 371069
Query 57828 TATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTTCAA 57886
|| || || | |||||||| ||| | |||||| | | | || | | | |||||||
Sbjct 371070 TACTCCTTATTGATCGATACCTACATCAAGGAC-CCTAAGGAAAGTGAATTCTTGTTCAA 371128
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || | || || || | |||| ||||||| |||||| | | | |||||| |
Sbjct 371129 TGCCATTCACACTATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCA 371188
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| ||| ||| ||| | || || ||| |||| || || | |||||||| | ||
Sbjct 371189 AGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCTTCTATCGAAGGTGTCTT 371248
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||| || | || || ||| ||||||| | || ||||||| || |
Sbjct 371249 CTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTTT 371308
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
||| || ||||| ||||| | | ||||| ||| | || || || ||||| ||| |
Sbjct 371309 GACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGCATGCTT 371368
Query 58127 AATGTACTCTCACATTGTCAATAAACC-GACGCGGGATCGCATCTTG--GACATTATCAC 58183
| ||| | | || | || ||||| ||| | | | | ||| | ||| ||||
Sbjct 371369 ATTGTTCGCCCATTTGAAGAACAAACCAGACCC---AGCAATTGTTGAAAAAATTGTCAC 371425
Query 58184 CGAGGCGGTCGCGATCGAA-AATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCG 58242
|||||| || | || ||| || || | || || ||| |||| || ||| |||| |
Sbjct 371426 CGAGGCTGTGGAAATTGAACAAAGA-TACTTCTTGGACGCCTTACCAGTTGCCTTGCTAG 371484
Query 58243 GTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298
|||||||| ||| | ||| | ||| ||||||| ||||| ||||||||||||
Sbjct 371485 GTATGAACGCTGACCTAATGAACCAATACGTTGAGTTCGTTGCTGACAGACTTTTG 371540
>seq9
Length=431692
Score = 170 bits (188), Expect = 2e-37
Identities = 421/639 (66%), Gaps = 0/639 (0%)
Strand=Plus/Plus
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| ||| ||| |||||||||| || || ||||| ||||| ||||| || | || ||
Sbjct 227084 TTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACG 227143
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
| || ||||| || | | ||| | | ||| | |||||| || | || ||||||||
Sbjct 227144 GATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCA 227203
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
|| || | | ||| |||||| ||||| |||||||| || || || || || || |||||
Sbjct 227204 TGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACCTCCTTGGTCCACATAACG 227263
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
|| || |||||| | || | | ||| || | | || || || | ||| ||
Sbjct 227264 AGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATTTGAAGTACCGTTGGTACC 227323
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | | |||||| | | || | ||||| || || | ||| | || || | |
Sbjct 227324 GGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGT 227383
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || |||| ||||| ||| || || || || || || ||| || ||
Sbjct 227384 CTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCAATAGAGTCATCCTT 227443
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| || | | |||||| ||||||||||| | | || ||| | || ||| | ||
Sbjct 227444 CATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGT 227503
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
||| ||||| || || |||| |||||| | |||||| || | | | | ||
Sbjct 227504 TGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAATTGTAGGTCTTCAGCACAGACTC 227563
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
||| || ||||| ||||| | || || ||||| | || || || || | || |
Sbjct 227564 AATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAAGTGCTGTGGCCGTTCAGC 227623
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| | ||||| | | | | || ||| ||||| | || || || || ||||||||
Sbjct 227624 CACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAAAGTCTTGAACCCAAAATACGT 227683
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
||| || || || | ||||| ||| ||||| || |||||
Sbjct 227684 ATACTTGAAATCTCTATCGTACACGATGGCTGAGTTCAA 227722
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || |||||| |||| || || || ||||| | || |||||| | || |||| | |
Sbjct 62719 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 62778
Query 31261 CGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319
|| | ||||| || ||| | | |||||||||| | || || ||||| || |
Sbjct 62779 TGACAATGTCAAGTCAAAGATTCAAG-ACAAGGAAGGTATCCCACCTGACCAACAAAGAT 62837
Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379
| || || ||||| || || ||||||||| || || || || || ||||||||||
Sbjct 62838 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 62897
Query 31380 AAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||| ||| | || | || | ||| |||| || ||||
Sbjct 62898 AAGAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGTA 62939
>seq12
Length=1029308
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| || || || || ||| |||| || ||| | |||
Sbjct 66083 ATGCAGATCTTCGTTAAGACGCTGACTGGTAAGACAATAACCCTCGAGGTCGAATCTTCC 66024
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| || |||||||| | || || |||||
Sbjct 66023 GACACTATTGACAACGTCAAGTCAAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 65964
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || ||||| ||||| ||||||| | || || ||| || |||
Sbjct 65963 CAGAGATTGATTTTTGCTGGTAAACAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 65904
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| ||||| || ||||| | || ||||||| ||||
Sbjct 65903 ATTCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGTA 65855
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||||| || |||||||| || ||| | || |||||| | |||
Sbjct 66311 ATGCAAATTTTTGTCAAAACTCTAACTGGCAAAACTATAACCCTAGAGGTTGAATCTTCC 66252
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | ||||| | ||| |||||| ||||| | || || |||||
Sbjct 66251 GACACTATTGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66192
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || || ||||||| | || || ||| || |||
Sbjct 66191 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGAACCTTGTCCGACTACAAC 66132
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| |||||||| || ||| | ||| | || | ||||| || || ||||
Sbjct 66131 ATCCAAAAAGAGTCCACTTTACATTTAGTGTTAAGACTAAGAGGTGGTA 66083
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || |||||| |||| || ||||| || || | || || ||| | ||
Sbjct 66767 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 66708
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| | ||| |||||| ||||| | || || |||||
Sbjct 66707 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCAA 66648
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || || ||||||| || || || |||||||||
Sbjct 66647 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACACTGTCTGATTATAAC 66588
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| |||||||| || | ||| | || || ||| |||| || ||||
Sbjct 66587 ATTCAGAAAGAATCTACCTTGCATTTAGTGCTGAGATTGAGAGGTGGTA 66539
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| |||||| | || || || || || ||| | || |||||| |
Sbjct 475466 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 475525
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 475526 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 475585
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || |||||||| | || || || ||
Sbjct 475586 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTAC 475645
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 475646 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 475696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766305274640
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