Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq15 154 3e-32
seq10 131 3e-25
seq5 102 2e-16
>seq15
Length=1049886
Score = 154 bits (170), Expect = 3e-32
Identities = 211/296 (71%), Gaps = 18/296 (6%)
Strand=Plus/Minus
Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392
|| ||| ||| |||||| || || |||| | | || | | ||||| |||||| |
Sbjct 445350 ATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATGGGGTTCACAGATAGAAAA 445291
Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452
| ||| ||||| || ||||| || |||||||||||| | ||||| |||||| |||| |
Sbjct 445290 GTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTGCTAAATACAAG 445231
Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT------GGCCA---ATATA 35503
|||||| | ||| ||| ||||| |||||||||||||||| || || ||| |
Sbjct 445230 ACCTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGGTCATTCATAAA 445171
Query 35504 CTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCT 35563
|||||||| |||||| |||||||||| || ||||||| || ||||||||
Sbjct 445170 CTAAAGAC---------AAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAATCCA 445120
Query 35564 ATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGT 35619
||| || || |||||| | || ||||||||||| | |||||||||||
Sbjct 445119 GCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTCTCACAATTTTATGT 445064
>seq10
Length=707288
Score = 131 bits (144), Expect = 3e-25
Identities = 336/506 (66%), Gaps = 18/506 (4%)
Strand=Plus/Plus
Query 101859 AGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCGGAACTAA 101915
|||||| |||||||| | | ||||| ||| | | ||| ||| | ||| |
Sbjct 371158 AGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGAC 371217
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
| || ||||||||| | | ||||| ||||||| ||| | ||||| ||||||||||
Sbjct 371218 TAGTCGCCTTTGCTTCTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCT 371277
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | ||||| || ||||| |||| ||| | |||| ||| || || || |||| || |
Sbjct 371278 GGTTGAAGAAGAGAGGTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAG 371337
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095
|||||||| | || ||||||||||||| | |||| | |||| || |
Sbjct 371338 ACGAAGGTTTGCACACCGACTTTGCATGCTTATTGTTCGCCCA----TTTGAAGA---AC 371390
Query 102096 CATCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
| | ||| || ||| ||| |||||||||| || || || |||||||||| |
Sbjct 371391 AAACCAGACCCAGCAATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGA 371450
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
| || | || | || ||| || | || |||||| | | |||| |||
Sbjct 371451 TACTTCTTGGACGCCTTACCAGTTGCCTTGCTAGGTATGAACGCTGACCTAATGAACCAA 371510
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATA 102269
||| |||| || || || || | ||| ||||||| | || || ||||| |||| |
Sbjct 371511 TACGTTGAGTTCGTTGCTGACAGACTTTTGGTTGCCTTCGGTAACAAGAAA--TACTACA 371568
Query 102270 ATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTT 102329
| || ||||||||| || ||||| || || || | | |||||||||||| |
Sbjct 371569 AGGTCGAAAACCCCTTCGACTTTATGGAAAACATCTCTTTGGCTGGTAAGACCAACTTCT 371628
Query 102330 TTGAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||||| | || || |||
Sbjct 371629 TTGAAAAGAGAGTTTCTGATTACCAA 371654
>seq5
Length=571131
Score = 102 bits (112), Expect = 2e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 94189 GAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCAC 94248
|||||||| || || || |||||||| |||| | | ||||| ||||||||| |||
Sbjct 298676 GAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCAT 298617
Query 94249 AAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATCC 94308
|| ||||| |||||||| | || | |||| ||||||||||||||| ||| | |||
Sbjct 298616 AAGTTTGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCT 298557
Query 94309 TTAAAGCACACATAAGGTGTTCCAGTTTC 94337
||| | |||| ||||||| || |||||
Sbjct 298556 TTATAAACCACAAAAGGTGTACCCGTTTC 298528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583784456235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |