Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq9 187 2e-42
seq5 172 5e-38
seq10 140 3e-28
>seq9
Length=431692
Score = 187 bits (206), Expect = 2e-42
Identities = 973/1541 (63%), Gaps = 39/1541 (3%)
Strand=Plus/Plus
Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179
|||| | |||||| || || || || || ||||| || || | | | || || ||
Sbjct 226176 AATAAATATGGATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTT 226235
Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239
||| |||||||| | || |||| | | |||||||| || || ||||| |||
Sbjct 226236 GAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGTTGGC 226295
Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCA 37299
||||| || ||| | ||||| ||||||||| | ||| |||| |||
Sbjct 226296 ATTGGCGCCATTGTTAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGATT 226355
Query 37300 TTCCAATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCTT 37357
| ||||||||| | | | ||| || | || |||||| ||| ||||||||||||| |
Sbjct 226356 TCCCAATCCCACATACCAAATGGCTTAGCGTT--CCACATGTCAAATTGTAGAATACCCT 226413
Query 37358 TACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAAC 37417
|| ||||||||| | | | || ||| || | | | || | ||| ||
Sbjct 226414 TAGAGGCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTCTGTGCCAATTCACAGG 226473
Query 37418 TAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTT 37477
| ||| || | |||| ||| || ||||||||||| ||| | || || ||| ||||
Sbjct 226474 AGGCTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCTT 226533
Query 37478 CTTCGCTATCGAATGCATAGCC-CAATAATATAAACACATCAGCCAAACCCTGAACACCG 37536
|||| | || || | ||| | ||| | ||| | ||| |||| ||| ||||||||
Sbjct 226534 CTTC-CGATTCAAAGGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCC 226592
Query 37537 ATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTG 37596
| | || |||||||| ||| |||| || | | ||| ||||||||||||||
Sbjct 226593 AAGGCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTA 226652
Query 37597 ATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTAT-TCTCAACTTGTC 37655
||| || | | | || | || | | || ||| | |||| | | |||| ||
Sbjct 226653 CGATCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTC-TC 226711
Query 37656 GAACATAAATACGTT-ATTATTAACAAATTTA-----CTCAACGAA-------------A 37696
||| || | || | | | ||| || || | ||| || || |
Sbjct 226712 GAAATTATA-ACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGGGCAA 226770
Query 37697 TAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTAC 37756
|||| |||||||||| || || ||||||| | | | | | || || ||
Sbjct 226771 TAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTCACAAC 226830
Query 37757 AGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAAT 37816
| | ||| ||| |||| || ||||| || ||| || | ||| ||||||| || |
Sbjct 226831 ACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGT 226890
Query 37817 CTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATA 37876
| || || | || | || || ||| |||| |||| || | | ||| | | |||||
Sbjct 226891 CCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATTGCATACCATA 226950
Query 37877 AACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTTTCGTATTCTATATATAA 37934
| || || |||| | | |||| | ||| | |||||| ||||||
Sbjct 226951 ACTTTTGGGCCTTAATGGT---TTTACCACGACCTTCCCT--TTCGTAACGGGTATATAG 227005
Query 37935 TTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAG 37994
| | ||| |||| ||||| ||||| ||| ||||| | | ||| | | ||
Sbjct 227006 CTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATAA 227065
Query 37995 AGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGT 38054
|| ||| |||| | || || |||| |||||| | ||||| | ||| | ||||
Sbjct 227066 AGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGG 227125
Query 38055 AAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATC 38114
|| ||||| | | | |||||| || || | ||||| | | ||| ||
Sbjct 227126 GAACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTC 227185
Query 38115 GAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACC 38174
||| ||||| || ||||||||||| | ||| | | || || ||||| || | |||
Sbjct 227186 GAAGATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGTTACC 227245
Query 38175 TCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATT 38234
||| || | | ||| | | | || || || | | | | |||||| | | |||||
Sbjct 227246 TCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACCCATT 227305
Query 38235 AGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAA 38294
|| | ||||| |||||| ||||||| ||| | | || || || | || |
Sbjct 227306 TGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAG 227365
Query 38295 TCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACC 38354
|| | ||||||||| || || || | ||| |||| ||| || |||||| | |||||
Sbjct 227366 ACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACC 227425
Query 38355 TTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGT 38414
||| ||| ||||||||| || | | || ||||| ||||||||| || ||||||
Sbjct 227426 TTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGT 227485
Query 38415 TCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATA 38474
|| ||||| ||||| || || || || || |||| || || ||||| |||| ||
Sbjct 227486 ACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAATTGTA 227545
Query 38475 TGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCAT 38534
|| | | ||| || ||||||| ||||| ||||| || | || | ||| | ||
Sbjct 227546 GGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAA 227605
Query 38535 ATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGT 38594
|| ||||| | ||| | || | ||| || | || | |||||| || || ||
Sbjct 227606 GTGCTGTGGCCGTTCAGCCACTTCACCGTTCAGTCTTAGCAAATACGAACGCTCCAAAGT 227665
Query 38595 TTTTATTCCAAAATAACTATA--TGAATAATCTCTATCGTA 38633
|| | |||||||| |||| |||| ||||||||||||
Sbjct 227666 CTTGAACCCAAAATACGTATACTTGAA--ATCTCTATCGTA 227704
>seq5
Length=571131
Score = 172 bits (190), Expect = 5e-38
Identities = 413/622 (66%), Gaps = 2/622 (0%)
Strand=Plus/Minus
Query 38013 TTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCT 38072
||| || || | ||| || | |||||| | ||| | |||| ||| |||||| | | |
Sbjct 298365 TTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACG 298306
Query 38073 ATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCA 38132
| |||||| || || |||||||| | | |||||| || |||||||| |||||
Sbjct 298305 AATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCA 298246
Query 38133 TGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCT 38192
|||||| | || | | | || || |||||||| | ||| ||||| | | ||| |
Sbjct 298245 TGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCTGGTCGACATAACG 298186
Query 38193 AACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACC 38252
| || |||||| | | | | ||| || | || || ||||| | |||||| ||||
Sbjct 298185 GGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCGTTTGTACC 298126
Query 38253 GGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATG 38312
| || |||| ||| | | || || ||| || | || || ||||| |||
Sbjct 298125 AGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGT 298066
Query 38313 TTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTT 38372
||| || || ||||| |||| ||| || || || | ||||| || ||| ||| |||||
Sbjct 298065 TTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTT 298006
Query 38373 TATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGT 38432
|| | | | |||||| ||||||||||| |||||| || || ||||| || ||
Sbjct 298005 CATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGT 297946
Query 38433 AGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATC 38492
||||| ||||| | || ||||| |||| | ||||||||||||| || | ||
Sbjct 297945 TGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTC 297886
Query 38493 TATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTAT 38552
|| || | ||||| || || || | || ||||| | | |||||||| | |||
Sbjct 297885 GATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTTGTGGACGTTCGGC 297826
Query 38553 TATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACT 38612
| || || | | |||| ||| || ||| || ||||| | |||||||||||
Sbjct 297825 CACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGAAACCAAAATAACT 297766
Query 38613 ATA-TGAATAATCTCTATCGTA 38633
|| || | ||||||| || ||
Sbjct 297765 GTACTGGA-AATCTCTGTCATA 297745
Score = 161 bits (178), Expect = 9e-35
Identities = 533/817 (65%), Gaps = 19/817 (2%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
||||| | || ||||||| || ||||| || || || | ||| |||| |||||
Sbjct 299582 GATGCGGCTTGGGTTCTCAAGTAGTACATACCGGTCTTCAATCCCTTCTTCCACCCGTAG 299523
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933
||||||||||| || || || | || || | | ||| ||| || |||
Sbjct 299522 AAATGCATACTTGTTAGCTTACCCATAGTTGGGGCACGCAAGAATAAATTCAAGGAATGA 299463
Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993
||| || ||| | || | |||||||||||| | | ||| ||||| || ||
Sbjct 299462 GATTGGTCGATATAAACAGAACGGTCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 299403
Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050
||||| || ||||| |||| | || | | | ||| | || | ||| ||||||
Sbjct 299402 TCCCAGACAGTTTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAACCTTGAATG 299343
Query 37051 GAACCATTATGTAACA-CAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACTTA 37108
|| || || ||| | ||| | | | ||| || | | || ||| ||| | | |
Sbjct 299342 GAGCCGTTCTGTGTAATCAAAT--ACTGTTTCATACCCTCATCCCAAATACCTAAATCAA 299285
Query 37109 TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTG 37168
| || | || || || || || ||||| || || || || ||||| || | | |
Sbjct 299284 CCAAATCGCGCAGTAAGTAAGGGTTCACAACTTGGAATTCACCGGATAAGACACGACGGG 299225
Query 37169 TATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAG 37228
|| || ||| ||| |||||||| | ||||||| || |||||||| ||||| |
Sbjct 299224 AGTACATGTTGGAGGTAACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGG 299165
Query 37229 ATGCAGTAGGCATTGGTGCTAT--TAGAAGGCTATTTCTCAATCCATGTGTATTAATTCT 37286
|||| |||||||||||||| || | ||| ||||| | |||||| | | | | |
Sbjct 299164 ATGCGGTAGGCATTGGTGCCATGGTCAAAG--AGTTTCTAATACCATGTTTCATGA-TAT 299108
Query 37287 CTTTTTT---AGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTA-ACCACATATCAT 37342
|||| | ||| | ||||||||| | | || ||||| || | |||||||||
Sbjct 299107 CTTTCCTCAAAGT--GTCCCAATCCCA-CATGCCGTAGGGTTTTTGATCCCACATATCGA 299051
Query 37343 ATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTT 37402
| || || ||||||| | ||||||||| | | | || || || || |||| |||
Sbjct 299050 ACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTT 298991
Query 37403 TAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATAT 37462
||||||||| ||| || ||| | | ||||| ||| |||||||| || ||||| ||||
Sbjct 298990 GAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAATATTTGGATAT 298931
Query 37463 TTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCA 37522
||| || || ||||| ||| || | | | | || ||||| ||||| |
Sbjct 298930 TTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTA 298871
Query 37523 AACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCA 37582
|||| |||||||| | | || ||||||||| || |||| ||||| || |||| |
Sbjct 298870 AACCTTGAACACCCAAGGCAATTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAA 298811
Query 37583 CTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619
| || || ||||| ||| || | | | |||| |||
Sbjct 298810 CAGGGTAGTAATTACGATCAATAACTCTGTTTAAATT 298774
>seq10
Length=707288
Score = 140 bits (154), Expect = 3e-28
Identities = 395/601 (66%), Gaps = 22/601 (4%)
Strand=Plus/Minus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| ||| || ||||| || || |||||||||||||| | || | ||| |||||
Sbjct 371374 AACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTAGAG 371315
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| || || || ||||||| |||| || || | ||| || || | || || |||||
Sbjct 371314 AAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGAACCG 371255
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTG 11800
|| ||||| | || || | || ||||| || |||| |||||| ||| | | ||
Sbjct 371254 GAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGCGTCA 371195
Query 11801 ----CTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852
|| || |||||| || ||||| || || |||| || ||| | || |
Sbjct 371194 GCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTCTGGGATAG 371140
Query 11853 TTTCTATAGCGTTAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTAT 11910
| | || || || || || | ||| |||| || || | | || ||||| ||
Sbjct 371139 TGTGAATGGCATTGAACAA--GAATTCACTTTCCTTAGGGTCCTTGATGTAGGTATCGAT 371082
Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970
||||| || |||| |||||||||||||| || ||||| || ||||||||||
Sbjct 371081 CAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACT 371022
Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030
|||||||| | || || || | || |||| | || || ||||| |||||
Sbjct 371021 CTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 370962
Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGT 12090
||| ||| || || ||||| || || | ||||| || | |||| ||| ||
Sbjct 370961 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGT-TTTCGT 370903
Query 12091 TAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146
| || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| |
Sbjct 370902 TCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 370843
Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206
|| || | | | ||||| || ||| || ||||| ||||| |||||||||| ||
Sbjct 370842 AAGAGGCTTCGGCACGCTTATAAGCTTGCCAAATTTCATGGTACTTGATAGGGAAAAGAA 370783
Query 12207 C 12207
|
Sbjct 370782 C 370782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524700438480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |