Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 1e-13 >seq12 Length=1029308 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 || ||||| || | || ||||||||||| ||||| || ||| || || || ||| Sbjct 66100 AACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCATCT 66159 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || || || ||||| ||| | |||| | || || || ||||| || ||||||||||| Sbjct 66160 TCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC- 66218 Query 139673 GTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| |||||| || | | || | ||||||| | || ||||| | ||| | || Sbjct 66219 CTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 66278 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || | ||||| || || ||||||||| Sbjct 66279 TTTGCCAGTTAGAGTTTTGACAAAAATTTGCATA 66312 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 ||||| || ||||||||||| || ||| || || || ||||| || ||||||||| Sbjct 65887 GTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGTTGTTTACCA 65946 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| | |||| | || || || || || || ||||| || || ||| |||||| || Sbjct 65947 GCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATC-TTGAATTTTTGACTT 66005 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||||| | || ||||| | ||| | ||||| || |||| ||| Sbjct 66006 GACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCGT 66065 Query 139747 TTTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 66066 CTTAACGAAGATCTGCATA 66084 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | || ||||| || | ||||| ||||| |||||||||||||| | Sbjct 66541 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 66600 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| || || ||||| ||| | |||| | || || || ||||| Sbjct 66601 AGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 66660 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||||| || | | || | || || | | || || Sbjct 66661 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 66719 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || |||||||| || || || || ||||||||| Sbjct 66720 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCATA 66768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063894586400