Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10 125 7e-24 >seq10 Length=707288 Score = 125 bits (138), Expect = 7e-24 Identities = 539/841 (64%), Gaps = 17/841 (2%) Strand=Plus/Minus Query 13563 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13622 || || ||||| || ||||| || ||| |||||| |||||||||||||| || ||| Sbjct 371674 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 371615 Query 13623 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATC 13681 || ||| || || ||||||||||| || || || ||| | ||| | | ||| | Sbjct 371614 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 371556 Query 13682 ACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13741 ||| | | | | | ||| ||||||| ||||||| ||||| ||||| || Sbjct 371555 GTTACCGAAGGCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496 Query 13742 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATT--CTTT-TTCTAT 13798 | |||||||||| | || || || | || || | |||| ||| || Sbjct 371495 AGCGTTCATACCTAGCAAGGCAACTGG---TAAGGCGTCCAAGAAGTATCTTTGTTCAAT 371439 Query 13799 AGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATG 13858 ||||||||| | | ||| || || ||| | || | || | ||| Sbjct 371438 TTCCACAGCCTCGGTGACAATTTTTTCAACAATTGCTGGGTCTGGTTTGTTCTTCAAATG 371379 Query 13859 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13918 || | ||| || ||||| || || | || || ||||| | ||| | |||||| Sbjct 371378 GGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 371319 Query 13919 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGA 13978 || || || || |||||||||| |||| || || ||||| || || | || || || Sbjct 371318 AGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGAAGGA 371259 Query 13979 CCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14038 ||||| ||||| | || || | | |||||| || | || || ||| |||||| | || Sbjct 371258 ACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 371199 Query 14039 TTTTTTGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 14097 | || | || |||||| || |||||| || | || | || || | Sbjct 371198 GTCAGCGTCTTGA-ATCCATCTTAGAGCCCACTCGGCCTTCTCACCGATTTCTGGGATAG 371140 Query 14098 TTTCAATAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 14155 | | ||| ||||| || || |||| | || |||| | ||||| |||| ||||| || Sbjct 371139 TGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGA--TGTAGGTATCGAT 371082 Query 14156 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 | |||| || ||||||| || || ||||| || || || |||||||| || | Sbjct 371081 CAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATAGAAACT 371022 Query 14216 TCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14275 | || || | ||| ||||| | | | || |||| |||| ||||||||||| || Sbjct 371021 CTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 370962 Query 14276 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14335 ||| ||| ||| || ||||| || | | | |||||| || ||| | | ||| Sbjct 370961 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTCGTT 370902 Query 14336 GAGT---TTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| || Sbjct 370901 CATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 370842 Query 14393 A 14393 | Sbjct 370841 A 370841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727898057800