Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq10 170 2e-37
>seq10
Length=707288
Score = 170 bits (188), Expect = 2e-37
Identities = 555/852 (65%), Gaps = 29/852 (3%)
Strand=Plus/Minus
Query 12842 TTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTT 12901
|| ||||||||| ||||| || || |||||| |||||||| ||||| || ||
Sbjct 371674 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 371615
Query 12902 CCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAA-TAGTATTTTTT 12960
|| | || || || ||||||||||| ||||| || |||| ||| | |||||||| ||
Sbjct 371614 CCAGCCAAAGAGATGTTTTCCATAAAGTCGAAGGGGTTTT-CGACCTTGTAGTATTTCTT 371556
Query 12961 ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATC 13020
|| || | | || | |||||||||||| ||||| | ||| || ||||||| ||
Sbjct 371555 GTTACCGAAGGCAACCAAAAGTCTGTCAGCAACGAACTCAACGTATTGGTTCATTAGGTC 371496
Query 13021 ACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGt---ttttttCTAT 13077
| |||||| |||| || || || | || || || |||| ||| ||| ||
Sbjct 371495 AGCGTTCATACCTAGCAAGGCAACTGGTAAGGCGTCC---AAGAAGTATCTTTGTTCAAT 371439
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----A 13133
|| || || ||| | || || | | | | | | || | | |||| | |
Sbjct 371438 TTCCACAGCCTCGGTGACAATTTTT-TCAACAATTGCTGG---GTCTGGTTTGTTCTTCA 371383
Query 13134 GATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCT 13193
||| |||| | |||||||| || |||||| ||||| ||||| | || | |
Sbjct 371382 AATGGGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATT 371323
Query 13194 CGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAA 13253
|||| || || || | ||| ||||| | |||| || || | ||| || || | || |
Sbjct 371322 CGTTAGAGAAGGTCAAACCTGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAGGCGA 371263
Query 13254 ACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACG 13313
| ||||| || || || | ||||| | | ||||| || | | ||||||||| ||
Sbjct 371262 AGGAACCGGAGAAGAAGACACCTTCGATAGAAGCAAAGGCGACTAGTCTTTCACCAAACA 371203
Query 13314 TACTATTTTTACTCTCTA-TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
| | ||| | |||| || ||||| | || || | || | |||
Sbjct 371202 -AGGCGTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGCCTTCTC----ACCGATTTC 371148
Query 13373 ----ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGT 13428
||| | | || || || || || | | |||||||| ||| || || ||
Sbjct 371147 TGGGATAGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTAGGGTCCTTGATGTAGGT 371088
Query 13429 ATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA 13488
||| ||||||||| || |||| |||||||||||||| ||| ||||||||||||||
Sbjct 371087 ATCGATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATTTGGAAACCATA 371028
Query 13489 AAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTT 13548
|||| | ||||||| | |||||||||| | | || |||| | |||||||| ||
Sbjct 371027 GAAACTCTTTGCCTCTGGAATTTGAACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATT 370968
Query 13549 AACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608
||| || |||||| ||| || ||||| ||||| | |||||| | | |||||
Sbjct 370967 AACAATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTT 370908
Query 13609 TTCTGACA---ACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGT 13665
||| || || ||| || ||| ||| || || ||||| | || ||| ||||
Sbjct 370907 TTCGTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGT 370848
Query 13666 CCAAAAAGAAGC 13677
||| ||||| ||
Sbjct 370847 CCAGAAAGAGGC 370836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |