Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 176 1e-38
seq10 176 1e-38
seq9 138 3e-27
seq11 132 1e-25
>seq12
Length=1029308
Score = 176 bits (194), Expect = 1e-38
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || || |||| ||| || ||||||||||||||||| ||||| |||
Sbjct 66538 ATACCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCA 66597
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||| ||||| ||||| || || |||||||| | ||||||||| || |||
Sbjct 66598 GACAGTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGA 66657
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| |||||||| |||| || || || || | |||||| || |||
Sbjct 66658 GGAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCG 66717
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || ||||| || | || || ||||| || |||||
Sbjct 66718 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 66767
Score = 161 bits (178), Expect = 2e-34
Identities = 154/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || || |||||||| || || |||| ||||| || ||||| |||||||| ||
Sbjct 66343 GTAGACTCCTTTTGAATATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCG 66402
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||||| || ||||| || ||||| ||||| ||||| |||| ||
Sbjct 66403 GCAAAAATCAATCTCTGTTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTTGACTTG 66462
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| ||||| || ||||||||||||||||| || ||
Sbjct 66463 ACGTTGTCGATCGTGTCGGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTC 66522
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 66523 TTGACAAAGATCTGCAT 66539
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || ||||| || ||||| || | ||||| || ||||| |||||||| |||
Sbjct 65887 GTAGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTGCCATCTTCCAGTTGTTTACCA 65946
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||||| || || || || ||||| ||||| ||||| |||| ||
Sbjct 65947 GCAAAAATCAATCTCTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTTTGACTTG 66006
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| ||||| || || || ||||||||||| || ||
Sbjct 66007 ACGTTGTCAATAGTGTCGGAAGATTCGACCTCGAGGGTTATTGTCTTACCAGTCAGCGTC 66066
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 66067 TTAACGAAGATCTGCAT 66083
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || || || || |||||||| | ||||| || ||||| | |||
Sbjct 475671 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGC 475612
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 475611 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTG 475552
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || ||||| |||||||||||||| ||
Sbjct 475551 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTACCGGTT 475492
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 475491 AAAGTCTTGACGAAAATTTGCATCTTG 475465
>seq10
Length=707288
Score = 176 bits (194), Expect = 1e-38
Identities = 378/556 (68%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC-TTAATAGATTG 268812
|||| || ||||| ||||| | |||||| | ||| ||||| | || || || || ||
Sbjct 370830 GCCGAAGCCTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCAT-GACTG 370888
Query 268813 GAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGC 268869
||| || || ||| | || || ||| ||||| ||| ||||||| ||||| ||
Sbjct 370889 GAACAACAGAATGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGC 370948
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||| ||||| ||||| ||||| | || || || |||| || || || ||
Sbjct 370949 CGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTTCAAAT 371008
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| || || | |||| || || ||||| || || |||||||||||||| || |
Sbjct 371009 TCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATTCATTCTGAAAC 371068
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATT-TT 269048
||| |||| || ||||| || || | || | ||| |||| ||| ||
Sbjct 371069 TTACTCCTTATTGATCGATACCTACATCAAGGA------CCCTAAGGAAAGTGAATTCTT 371122
Query 269049 CTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGA 269099
||| ||| | ||||| | | | ||||||| | || |||||||| |
Sbjct 371123 GTTCAATGCCATTCACACTATCCCAGAAATCGGTGAGAAGG----CCGAGTGGGCTCTAA 371178
Query 269100 AATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAG 269156
|||||| | || | |||||| || ||||| |||| || ||||| || | |
Sbjct 371179 GATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCTTCTATCG 371238
Query 269157 AAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTA 269216
||||| | ||||| || || || || ||| | || || ||||||||||| ||||| | |
Sbjct 371239 AAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAGGTATGA 371298
Query 269217 TGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACT 269276
||||||| || || ||||||||||||||||| |||| ||||||||||| ||| |||||
Sbjct 371299 TGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACT 371358
Query 269277 TCGCTTGTTTATTATT 269292
| || || ||||| ||
Sbjct 371359 TTGCATGCTTATTGTT 371374
>seq9
Length=431692
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| ||||| || |||||||| ||||| || ||||||
Sbjct 62940 ATACCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCA 62881
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 62880 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 62821
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 62820 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 62761
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 62760 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 62720
>seq11
Length=687600
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 621649 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 621708
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| ||||||||||||||| | ||| || || ||||| || | || ||||| |||||
Sbjct 621709 GATAAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGT 621768
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 621769 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 621828
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| |||| || || |||||||||||
Sbjct 621829 ACTTCTAAAGTGATGGTCTTACCAGT 621854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398149211036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |