Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq15 138 1e-27
seq2 100 3e-16
>seq15
Length=1049886
Score = 138 bits (152), Expect = 1e-27
Identities = 302/451 (67%), Gaps = 35/451 (8%)
Strand=Plus/Plus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | |||| || || || ||||| ||| ||||| || || ||||||||
Sbjct 444841 TTGTTCTTTCAAGGCTTCAATGTGGTCCTTATAAACATGTGCATCCCCCAGAGTATGAAT 444900
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||| |||||||| | ||| || ||| ||| |||||| | || || | ||||| ||
Sbjct 444901 AAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAGAGCATATGA 444960
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
|| | |||||| ||||| || || ||||| || || | ||| |||||| |||
Sbjct 444961 TGCAATATTAAATGGTACGCCCAACCCCATGTCACAAGAACGTTGGTATAACAAACATGA 445020
Query 6985 CAAGA------TAAAATATTG-------TCTATAG---------CATAAAATTGACACAA 7022
| | || | || ||| | | |||||||||| | ||
Sbjct 445021 AAGGTGGGGCTTACCAGATCCGTCTCCTTCTTTGGGGAAACTGACATAAAATTGTGAGAA 445080
Query 7023 TACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAA 7082
| || ||||| || ||| | || || | ||||| ||||||||||||| |||| |
Sbjct 445081 AATGTGGCATGGTGGCAAAGCCATCTTGTCAAAATCAGCTGGATTCCAAGCACTCATAAT 445140
Query 7083 AATACGTCTATCATTTGGATTTGTTTTTAATTT-TGTTATAATTATTTG---TAATTGAT 7138
||| | |||||||| |||||||| |||| ||| || ||| | || |||||||
Sbjct 445141 AATTCTTCTATCATAAGGATTTGTCTTTAGTTTATG----AATGACCTGCTTCAATTGAT 445196
Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198
| |||||||| || |||| | || ||| | | || ||||| || ||||| ||||
Sbjct 445197 CAATACCCTGTCCAGCATAGTCGTCATCACAGGTCTTGTATTTAGCACCGAAATGCCTCC 445256
Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACC 7229
|||| || ||||||| || |||||||| ||
Sbjct 445257 ATTGGAATCCATAAACGGGCCCTAAATCCCC 445287
Score = 96.9 bits (106), Expect = 4e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| || ||||| || | || | ||| |||| ||||| || ||||| ||| |
Sbjct 585294 GTTAAAGTTCGTGTAAGAACTACGAAGGTTCCTCAAATTGGTGACAAATTTGCCTCTCGT 585235
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
|| |||||| || || |||||| | |||||| |||||||||||| ||||| |
Sbjct 585234 CATGGTCAAAAGGGTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACAGCA 585175
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||||| || |||||| | || || || || || ||| ||||| ||| |||||
Sbjct 585174 GAAGGTATTGTTCCGGATTTAATCATCAATCCTCACGCTATTCCATCTCGTATGAC 585119
>seq2
Length=789597
Score = 100 bits (110), Expect = 3e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 164794 GTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATT 164853
|| |||||||| || | |||| || |||||||| || || |||||||| || ||
Sbjct 381039 GTAGTTAATCAATTATTAGCTAAGATGGATGGTGTTGATCAATTGAATAATATATTGGTT 380980
Query 164854 GTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTA 164913
| |||||||||||||| |||||||| ||| |||| | ||||| || ||| ||||
Sbjct 380979 ATTGGTATGACCAACCGTAAGGATTTAATAGATAGTGCTCTTTTACGTCCAGGTAGATTT 380920
Query 164914 GAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
||| | || | ||||| ||||| ||| || ||||| | || ||||||||
Sbjct 380919 GAAGTCCAAGTTGAAATTCATTTACCGGACGAAAAAGGAAGACTCCAAATTTT 380867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |