Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03-
21] 17 sequences; 11,883,118 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 3e-35
seq11 102 7e-17
>seq12
Length=1029308
Score = 163 bits (180), Expect = 3e-35
Identities = 180/240 (75%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || |||||||||| ||| |||||||| | |||||| |||||||| |
Sbjct 66300 AAAAATTTGCATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGAAT 66359
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|| |||||| | || || ||| ||||| ||||| ||| |||| || ||||| ||
Sbjct 66360 ATTGTAATCGGATAACGTTCTGCCATCTTCCAGTTGTTTACCGGCAAAAATCAATCTCTG 66419
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|| ||||||||||||||||| || || | |||||||| ||||||| | ||| |||||
Sbjct 66420 TTGGTCTGGAGGAATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCGATCGTGTC 66479
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || | || || || || ||||| || || || ||||||||||||||
Sbjct 66480 GGAAGATTCGACCTCCAGAGTAATAGTCTTACCAGTCAGCGTCTTGACAAAGATCTGCAT 66539
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| | || ||||| || || ||||| || || ||||| | ||| || ||| |
Sbjct 66085 CCACCTCTTAGTCTTAACACTAAATGTAAAGTGGACTCTTTTTGGATGTTGTAGTCGGAC 66144
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| ||||| || || ||| |||| || ||||| || || |||||||||
Sbjct 66145 AAGGTTCTGCCATCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCTGGAGGA 66204
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | |||||||| ||||||| | | | |||||| | || ||
Sbjct 66205 ATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 66264
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || ||||| ||||| |||||||| ||||| || |||||
Sbjct 66265 TCTAGGGTTATAGTTTTGCCAGTTAGAGTTTTGACAAAAATTTGCAT 66311
Score = 141 bits (156), Expect = 8e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| || ||| || ||||| |||||||| || || | ||||||||| |
Sbjct 66541 CCACCTCTCAATCTCAGCACTAAATGCAAGGTAGATTCTTTCTGAATGTTATAATCAGAC 66600
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
| ||||| | ||| ||||| || || ||| |||| || || || || || |||||||
Sbjct 66601 A--GTGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAG 66658
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
|||||||||||||||| | |||||||| ||||||| | | || |||| ||||
Sbjct 66659 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGA 66718
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | || |||||||| || || | ||| || ||||| || |||||
Sbjct 66719 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 66767
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | || |||| ||| | ||||||||||||||| | ||| || ||| |
Sbjct 65857 CCACCCCTCAACCTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAC 65916
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| ||||| ||||| || |||| || ||||| || || ||||| |||
Sbjct 65917 AAGGTTCTGCCATCTTCCAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGTGGA 65976
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| || || | |||||||| ||||||| | | | |||||| | |||||
Sbjct 65977 ATACCTTCCTTATCTTGAATTTTTGACTTGACGTTGTCAATAGTGTCGGAAGATTCGACC 66036
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || ||||| || || || || |||||||||||
Sbjct 66037 TCGAGGGTTATTGTCTTACCAGTCAGCGTCTTAACGAAGATCTGCAT 66083
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||||||||| ||||||||||| | ||| || || |
Sbjct 475695 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 475636
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| |||| || || || ||||||| |||||||| || || || ||
Sbjct 475635 AAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 475576
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | |||||||| || ||
Sbjct 475575 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 475516
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||| || || || || |||||
Sbjct 475515 TCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 475469
>seq11
Length=687600
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||||||||| | ||| || ||
Sbjct 621652 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 621711
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || |||| || || ||| ||||||| |||||||| || || || ||
Sbjct 621712 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 621771
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | ||||||| || ||
Sbjct 621772 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 621831
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
|| | |||||||| || ||||| | ||| || || |||
Sbjct 621832 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 621870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291104738120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |