Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq14 116 6e-22 seq2 113 7e-21 >seq14 Length=769158 Score = 116 bits (128), Expect = 6e-22 Identities = 188/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| | | ||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct 580011 GCTAAGCGTCATAGAAAGAT-TCTAAGAGATAACATCCAAGGTATCACTAAGCCAGCTAT 579953 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 579952 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 579893 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || || || Sbjct 579892 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 579833 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || || || ||||| | ||||| Sbjct 579832 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTACGCTTTGAAGAGACAAGG 579773 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 579772 TAGAACCTTATATGGTTTCGGTGGTTAA 579745 >seq2 Length=789597 Score = 113 bits (124), Expect = 7e-21 Identities = 188/269 (70%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 244489 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 244431 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||| | | ||||| ||||||||| ||||||| ||| |||| ||||| | Sbjct 244430 TAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATCTCTGGTTTGATCTACGAAGAAGT 244371 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || || || Sbjct 244370 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 244311 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 244310 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 244251 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | |||||||| || |||||| Sbjct 244250 TAGAACCTTATATGGTTTCGGTGGTTAAT 244222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075184456781